Documents
Welcome to the collection of documents for NITRC Community.
Adding Documents: Members of NITRC Community may submit documents to the folders below; however, the moderator will decide whether or not to publish a document.
Deleting Documents: If you find an out-dated document, please send a request to moderator@nitrc.org.
Add New Document |
Folders/Documents | Add |
► Application Publications ( 2 ) | + |
► Conferences ( 3 ) | + |
► Education ( 4 ) | + |
► Forum Attachments ( 2 ) | + |
► Job Postings ( 1 ) | + |
► News Releases ( 2 ) | + |
► NITRC Art Work ( 12 ) | + |
► NITRC Presentations ( 9 ) | + |
► NITRC Use Cases ( 1 ) | + |
► NITRC Videos ( 15 ) | + |
► Other Logos ( 8 ) | + |
► Other Press ( 1 ) | + |
► Publications ( 5 ) | + |
▼ Published Reviews ( 116 ) | + |
► ABSORB for groupwise registration ( 1 ) | + |
► Advanced Normalization Tools ( 1 ) | + |
► AFNI ( 6 ) | + |
▼ All ( 43 ) | + |
Ardekani BA, Journal of Neuroscience Methods, 2005 Description: Quantitative comparison of algorithms for inter-subject registration of 3D volumetric brain MRI scans Updated: Sep 18, 2009 | |
Arnold JB, Neuroimage, 2001 Description: Qualitative and Quantitative Evaluation of Six Algorithms for Correcting Intensity Nonuniformity Effects Updated: Apr 7, 2009 | |
Ceritoglu C, Frontiers in Human Neuroscience, 2010 Description: Large deformation diffeomorphic metric mapping registration of reconstructed 3D histological section images and in vivo MR images Updated: Dec 14, 2010 | |
Cherbuin N, PLoS ONE, 2009 Description: In Vivo Hippocampal Measurement and Memory: A Comparison of Manual Tracing and Automated Segmentation in a Large Community-Based Sample Updated: Apr 27, 2009 | |
Clark KA, Neuroimage, 2006 Description: Impact of acquisition protocols and processing streams on tissue segmentation of T1 weighted MR images Updated: Apr 7, 2009 | |
Cox RW, Magnetic Resonance in Medicine, 1999 Description: Real-Time 3D Image Registration for Functional MRI Updated: Jul 16, 2010 | |
Eglen SJ, BMC Neuroscience, 2008 Description: Analysis of spatial relationships in three dimensions: tools for the study of nerve cell patterning Updated: Jul 16, 2010 | |
Fennema-Notestine C, Human Brain Mapping, 2006 Description: Quantitative Evaluation of Automated Skull-Stripping Methods Applied to Contemporary and Legacy Images: Effects of Daignosis, Bias Correction, and Slice Location Updated: Sep 18, 2009 | |
Gholipour A, IEEE Transactions on Medical Imaging, 2007 Description: Brain Functional Localization: A Survey of Image Registration Techniques Updated: Dec 14, 2010 | |
Gold S, Human Brain Mapping, 1998 Description: Functional MRI Statistical Software Packages: A Comparative Analysis Updated: Apr 7, 2009 | |
Hanke M, Neuroinformatics, 2009. Description: PyMVPA: a Python Toolbox for Mltivariate Pattern Analysis of fMRI Data Updated: May 14, 2010 | |
Hellier P, IEEE Transactions on Medical Imaging, 2003 Description: Retrospective Evaluation of Intersubject Brain Registration Updated: Apr 7, 2009 | |
Jia H, NeuroImage, 2010 Description: ABSORB: Atlas building by self-organized registration and bundling Updated: Jul 27, 2010 | |
Ju L, NeuroImage, 2005 Description: Quantitative evaluation of three cortical surface flattening methods Updated: Apr 7, 2009 | |
Klein A, BMC Medical Imaging, 2005 Description: Mindboggle: Automated brain labeling with multiple atlases Updated: Jul 16, 2010 | |
Klein A, NeuroImage, 2005 Description: Mindboggle: a scatterbrained approach to automate brain labeling Updated: Jul 16, 2010 | |
Klein A, NeuroImage, 2008 Description: Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration Updated: Nov 9, 2009 | |
Lee JK, NeuroImage, 2006 Description: A novel quantitative cross-validation of different cortical surface reconstructi on algorithms using MRI phantom Updated: Apr 7, 2009 | |
Marcus DS, Neuroinformatics, 2007 Description: The Extensible Neuroimaging Archive Toolkit: An Informatics Platform for Managing, Exploring, and Sharing Neuroimaging Data Updated: Jul 16, 2010 | |
Mikheev A, Journal of Magnetic Resonance Imaging, 2008 Description: Fully Automatic Segmentation of the Brain From T1-Weighted MRI Using Bridge Burner Algorithm Updated: Dec 14, 2010 | |
Morey RA, NeuroImage, 2009 Description: A comparison of automated segmentation and manual tracing for quantifying hippocampal and amygdala volumes Updated: Nov 10, 2009 | |
Morgan VL, Computerized Medical Imaging and Graphics, 2007 Description: Comparison of fMRI statistical software packages and strategies for analysis of images containing random and stimulus-correlated motion Updated: Apr 7, 2009 | |
Muller H-M, Neuroinformatics, 2008 Description: Textpresso for Neuroscience: Searching the Full Text of Thousands of Neuroscience Research Papers Updated: Jul 16, 2010 | |
Pengas G, Journal of Neuroimaging, 2008 Description: Comparative Reliability of Total Intracranial Volume Estimation Methods and the Influence of Atrophy in a Longitudinal Semantic Dementia Cohort Updated: Apr 7, 2009 | |
Peng H, Nature Biotechnology, 2010 Description: V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets Updated: Jul 16, 2010 | |
Rex DE, NeuroImage, 2004 Description: A meta-algorithm for brain extraction in MRI Updated: Sep 18, 2009 | |
Rodionov R, Magnetic Resonance Imaging, 2009 Description: Evaluation of atlas-based segmentation of hippocampi in healthy humans Updated: Sep 18, 2009 | |
Rohlfing T, Human Brain Mapping, 2010 Description: The SRI24 Multichannel Atlas of Normal Adult Human Brain Structure Updated: Jul 16, 2010 | |
Rohlfing T, Proc Soc Photo Opt Instrum Eng, 2008 Description: The SRI24 Multi-Channel Brain Atlas: Construction and Applications Updated: Jul 16, 2010 | |
Segonne F, NeuroImage, 2004 Description: A hybrid approach to the skull stripping problem in MRI Updated: Jul 16, 2010 | |
Shattuck DW, NeuroImage, 2009 Description: Online resource for validation of brain segmentation methods Updated: Jul 16, 2010 | |
Sidtis J, NeuroImage , 2003. Description: Predicting performance from functional imaging data: methods matter. Updated: Nov 9, 2009 | |
Sled J, IEEE Transactions on Medical Imaging, 1998 Description: A Nonparametric Method for Automatic Correction of Intensity Nonuniformity in MRI Data Updated: Dec 14, 2010 | |
Tae WS, Neuroradiology, 2007 Description: Validation of hippocampal volumes measured using a manual method and two automated methods (FreeSurfer and IBASPM) in chronic major depressive disorder Updated: Apr 7, 2009 | |
Tsang O, Conf Proc IEEE Eng Med Biol Soc, 2008 Description: Comparison of tissue segmentation algorithms in neuroimage analysis software tools Updated: Dec 14, 2010 | |
Wang Y, Neuroimage, 2011 Description: DTI registration in atlas based fiber analysis of infantile Krabbe disease Updated: Feb 4, 2013 | |
Warfield SK, IEEE Transactions on Medical Imaging, 2004 Description: Simultaneous Truth and Performance Level Estimation (STAPLE): An Algorithm for the Validation of Image Segmentation Updated: Jul 16, 2010 | |
Wu M, Med Image Comput Comput Assist Interv, 2008 Description: Comparison of EPI Distortion Correction Methods in Diffusion Tensor MRI Using a Novel Framework Updated: Dec 14, 2010 | |
Yassa MA, NeuroImage, 2009 Description: A quantitative evaluation of cross-participant registration techniques for MRI studies of the medial temporal lobe Updated: Nov 10, 2009 | |
Yeh F-C, IEEE Transactions on Medical Imaging, 2010. Description: Generalized q-Sampling Imaging Updated: Sep 9, 2010 | |
Yeh FC, Neuroimage, 2011 (1) Description: Estimation of fiber orientation and spin density distribution by diffusion deconvolution Updated: Feb 5, 2013 | |
Yeh FC, Neuroimage, 2011 (2) Description: NTU-90: a high angular resolution brain atlas constructed by q-space diffeomorphic reconstruction Updated: Feb 5, 2013 | |
Yushkevich PA, NeuroImage, 2006 Description: User-guided 3D active contour segmentation of anatomical structures: Significantly improved efficiency and reliability Updated: Jul 16, 2010 | |
► Automatic Registration Toolbox ( 2 ) | + |
► BrainMask Volume Processing Tool ( 2 ) | + |
► BRAINSDemonWarp ( 1 ) | + |
► BrainSuite ( 5 ) | + |
► BrainVISA ( 1 ) | + |
► DSI Studio ( 3 ) | + |
► DTI-TK ( 1 ) | + |
► FreeSurfer ( 11 ) | + |
► FSL ( 11 ) | + |
► ITK-SNAP ( 1 ) | + |
► LDDMM ( 2 ) | + |
► MedINRIA ( 1 ) | + |
► Mindboggle: automated brain labeling ( 2 ) | + |
► N3 - MINC B0 nonuniformity correction ( 1 ) | + |
► PyMVPA ( 1 ) | + |
► Segmentation Validation Engine ( 1 ) | + |
► Spatial Analysis 3D ( 1 ) | + |
► SPM ( 10 ) | + |
► SRI24 Atlas: Normal Adult Brain Anatomy ( 2 ) | + |
► STAPLE ( 1 ) | + |
► Template Image Processing Library ( 1 ) | + |
► Textpresso - literature search engine ( 1 ) | + |
► Vaa3D and Vaa3D-Neuron ( 1 ) | + |
► WFU_PickAtlas ( 1 ) | + |
► XNAT ( 1 ) | + |
► Scientific Posters ( 2 ) | + |