Type: Error Time: Thu Aug 16 19:09:22 2012 Description: ERROR: In /HJ/Shape_analysis/Slicer_3_6/Slicer3/Modules/CommandLineModule/vtkCommandLineModuleLogic.cxx, line 1577 vtkCommandLineModuleLogic (0x12bac4d90): Shape Analysis Module terminated with a fault. Type: Error Time: Thu Aug 16 19:09:22 2012 Description: ERROR: In /HJ/Shape_analysis/Slicer_3_6/Slicer3/Modules/CommandLineModule/vtkCommandLineModuleLogic.cxx, line 1499 vtkCommandLineModuleLogic (0x12bac4d90): Shape Analysis Module standard error: Executing BatchMake: Error! Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Cannot read the directory /HJ/Shape_analysis/Tutorial_output/MRML/TransformFiles/ Type: Information Time: Thu Aug 16 19:09:22 2012 Description: Shape Analysis Module standard output: ------ Shape Analysis Module start ----- Computing ShapeAnalysisModule... /HJ/Shape_analysis/Tutorial_output /HJ/Shape_analysis/Tutorial_output/ /HJ/Shape_analysis/Tutorial_output/ShapeAnalysisModule.bms /HJ/Shape_analysis/Tutorial_output/ShapeAnalysisModule.bms Number of Datas: 4 Executing BatchMake... Error (74): 'SetApp() cannot find the application: SegPostProcessCLP Error (93): 'SetApp() cannot find the application: GenParaMeshCLP Error (119): 'SetApp() cannot find the application: ParaToSPHARMMeshCLP Error (171): 'SetApp() cannot find the application: ParaToSPHARMMeshCLP Executing BatchMake: Done! Execute Meshmath... Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory Error: Could not run MeshMath: No such file or directory meshmath template Type: Information Time: Thu Aug 16 19:09:21 2012 Description: Shape Analysis Module command line: /HJ/Shape_analysis/SPHARM/spharm_build/bin/ShapeAnalysisModule --sx 0.5 --sy 0.5 --sz 0.5 --label 1 --NumberofIterations 20 --SubdivLevelValue 10 --SPHARMDegreeValue 15 --thetaIterationValue 100 --phiIterationValue 100 --columVolumeFile 0 --varX 10 --varY 10 --varZ 10 --regTemplate None --flipTemplate None --paraOutTemplate --noFlip --HorizontalGridPara 1 --VerticalGridPara 2 --DoParticlesCorrespondence --UseProcalign --startRegularization 10 --endRegularization 0.01 --optimizationIt 200 --RelativeWeight 1 /HJ/Shape_analysis/ShapeAnalysisModule_TutorialData/InputFile_ShapeAnalaysis_4data.csv /HJ/Shape_analysis/Tutorial_output Type: Information Time: Thu Aug 16 19:09:21 2012 Description: CommandLineModule Type: Information Time: Thu Aug 16 19:09:21 2012 Description: /HJ/Shape_analysis/SPHARM/spharm_build/bin/ShapeAnalysisModule Type: Information Time: Thu Aug 16 19:09:21 2012 Description: Found CommandLine Module, target is