Hi, I have downloaded and installed the binary release of Vaa3D on my mac running macOS Sierra 10.12.3. The plugins are all in the parallell plugin folder but do not appear in the "plugin manager".

Any advice?

It seems our released mac version has some compatibility issues with the latest macOS. We are currently working on this, and will get back to you as soon as we can.

Thanks,

Zhi

Can you generate screen shot? Can you rerun the "Re-scan all plugins" from the main  menu?



 
Originally posted by Tchern Lenn:

I have the same issue as Tchern. 

The "Rescan all plugins" doesn't work, even though all the plug-ins are downloaded and in the Vaa3d directory
Originally posted by Hanchuan Peng:

Interesting, I just upgraded to 10.12 and did not see this problem at all....

What I did was to run the Vaa3D I built locally on my own machine... all plugins can be found w/o a problem!

If I also ran the command line code as follows you can see I can find 132 plugins smoothly

>>bin/vaa3d64.app/Contents/MacOS/vaa3d64 -h
[bin/vaa3d64.app/Contents/MacOS/vaa3d64]
[-h]

Vaa3D: a 3D image visualization and analysis platform developed by Hanchuan Peng and colleagues.
Usage: v3d -h -M moduleCode [all other options specific to different modules]
-h/H help information.
-i open single or multiple image (.tif/.tiff, .lsm, .mrc, .raw/.v3draw) / object (.ano, .apo, .swc, .marker) files
-o indicates single or multiple outputs
-x a string indicates the full path or a unique partial path of a dll (for a plugin) to be launched.
-m a string indicates which menu of a plugin will be called.
-f a string indicates which function of a plugin will be called.
-p a string indicates parameters that plugin function use
-pf a string read from configuration file indicates parameters that plugin function use
-v force to open a 3d viewer when loading an image, otherwise use the default v3d global setting (from "Adjust Preference")
-na open NeuronAnnotator work-mode directly
-cmd [headless command-line arguments, intended for compute grid use. Try '-cmd -h' for more information on this option]
2017-05-16 20:46:40.095 vaa3d64[1696:91150] *** WARNING: Method userSpaceScaleFactor in class NSView is deprecated on 10.7 and later. It should not be used in new applications. Use convertRectToBacking: instead.
Searching in ./plugins ......
Searching ./plugins done.
I have the same issue as Tchern. 

The "Rescan all plugins" doesn't work, even though all the plug-ins are downloaded and in the Vaa3d directory
Originally posted by Hanchuan Peng: [/quote]

I guess that might be a dll issue with previous old versions of vaa3d. You can try to build the latest code or asking us for a latest binary....

Originally posted by Hanchuan Peng:

Could you also try our released version (https://github.com/Vaa3D/release/release...)? Thanks.

Just tested, no problem....

The following are some print-out for the command line running as well. Some junk info at the beginning of the print-out clearly due to the back-compatability of the new Mac OS X 10.12 to the older Mac OS X Cocoa, but the Vaa3D plugins can be found without a problem. Yeah!

/Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/MacOS/vaa3d -h
objc[2176]: Class QCocoaColorPanelDelegate is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d79dc0) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dbedc0). One of the two will be used. Which one is undefined.
objc[2176]: Class QMacSoundDelegate is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7ae60) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dbfe60). One of the two will be used. Which one is undefined.
objc[2176]: Class QCocoaPanel is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7b5c0) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc05c0). One of the two will be used. Which one is undefined.
objc[2176]: Class QCocoaView is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7c040) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc1040). One of the two will be used. Which one is undefined.
objc[2176]: Class QCocoaWindow is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7c600) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc1600). One of the two will be used. Which one is undefined.
objc[2176]: Class QCocoaWindowDelegate is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7cb00) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc1b00). One of the two will be used. Which one is undefined.
objc[2176]: Class QCocoaMenuLoader is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7d4a0) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc24a0). One of the two will be used. Which one is undefined.
objc[2176]: Class QNSApplication is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7d640) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc2640). One of the two will be used. Which one is undefined.
objc[2176]: Class QCocoaApplicationDelegate is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7dba0) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc2ba0). One of the two will be used. Which one is undefined.
objc[2176]: Class QCocoaWindowCustomThemeFrame is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7e0e0) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc30e0). One of the two will be used. Which one is undefined.
objc[2176]: Class QCocoaToolBarDelegate is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7e320) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc3320). One of the two will be used. Which one is undefined.
objc[2176]: Class QCocoaMenu is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7e5a0) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc35a0). One of the two will be used. Which one is undefined.
objc[2176]: Class QNSOpenSavePanelDelegate is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7eec0) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc3ec0). One of the two will be used. Which one is undefined.
objc[2176]: Class QCocoaFontPanelDelegate is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7f420) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc4420). One of the two will be used. Which one is undefined.
objc[2176]: Class QNSWindowProxy is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7f8c0) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc48c0). One of the two will be used. Which one is undefined.
objc[2176]: Class QNSPanelProxy is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7fa80) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc4a80). One of the two will be used. Which one is undefined.
objc[2176]: Class QCocoaPageLayoutDelegate is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7fc40) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc4c40). One of the two will be used. Which one is undefined.
objc[2176]: Class QCocoaPrintPanelDelegate is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d7fda0) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc4da0). One of the two will be used. Which one is undefined.
objc[2176]: Class QNSMenu is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d826c0) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc76c0). One of the two will be used. Which one is undefined.
objc[2176]: Class QNSStatusItem is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d82960) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc7960). One of the two will be used. Which one is undefined.
objc[2176]: Class QNSImageView is implemented in both /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (0x122d82c20) and /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui (0x121dc7c20). One of the two will be used. Which one is undefined.
[/Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/MacOS/vaa3d]
[-h]

Vaa3D: a 3D image visualization and analysis platform developed by Hanchuan Peng and colleagues.
Usage: v3d -h -M moduleCode [all other options specific to different modules]
-h/H help information.
-i open single or multiple image (.tif/.tiff, .lsm, .mrc, .raw/.v3draw) / object (.ano, .apo, .swc, .marker) files
-o indicates single or multiple outputs
-x a string indicates the full path or a unique partial path of a dll (for a plugin) to be launched.
-m a string indicates which menu of a plugin will be called.
-f a string indicates which function of a plugin will be called.
-p a string indicates parameters that plugin function use
-pf a string read from configuration file indicates parameters that plugin function use
-v force to open a 3d viewer when loading an image, otherwise use the default v3d global setting (from "Adjust Preference")
-na open NeuronAnnotator work-mode directly
-cmd [headless command-line arguments, intended for compute grid use. Try '-cmd -h' for more information on this option]
Searching in ./plugins ......
Searching ./plugins done.
Found [133] plugins
#1 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/_Vaa3D_plugin_creator/libplugin_creator_debug.dylib
#2 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/AllenApps/neuron_populator/libNeuronPopulator_debug.dylib
#3 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/celegans/atlasguided_seganno/libplugin_atlasguided_stranno_partial_debug.dylib
#4 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/celegans/celegans_straighten/libcelegans_straighten_debug.dylib
#5 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/cell_counting/quickFind/libcellSegmentation_debug.dylib
#6 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/color_channel/split_extract_channels/libchannelsplit_debug.dylib
#7 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/data_IO/convert_and_load_with_Bioformats/libbioformats_loader_debug.dylib
#8 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/data_IO/convert_file_format/libconvert_file_format_debug.dylib
#9 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/data_IO/convert_Neurolucida_ASC_file_to_SWC/libconvert_Neurolucida_ASC_file_to_SWC_debug.dylib
#10 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/data_IO/NIFTI_file_reader/libNifTi_reader_debug.dylib
#11 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/data_IO/save_Z_Slices/libsaveZSlices_debug.dylib
#12 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/data_type/5D_Stack_Converter/libmovieZCswitch_debug.dylib
#13 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/data_type/Convert_8_16_32_bits_data/libdatatypeconvert_debug.dylib
#14 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/data_type/Convert_Image_to_AtlasViewMode/libconvert_img_to_atlasview_debug.dylib
#15 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/data_type/intensity_rescale/librescale_debug.dylib
#16 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/FlyWorkstation_utilities/Janelia_blend_multiscanstacks/libJanelia_blend_multiscanstacks_debug.dylib
#17 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/FlyWorkstation_utilities/Janelia_clonalSelect/libJanelia_clonalSelect_debug.dylib
#18 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/FlyWorkstation_utilities/Janelia_ifusion/libJanelia_ifusion_debug.dylib
#19 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/FlyWorkstation_utilities/Janelia_istitch/libJanelia_imageStitch_debug.dylib
#20 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/FlyWorkstation_utilities/Janelia_lobeseger/libJanelia_lobeseg_debug.dylib
#21 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/FlyWorkstation_utilities/Janelia_refExtract/libJanelia_refExtract_debug.dylib
#22 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/FlyWorkstation_utilities/Janelia_SSD_registration/libJanelia_plugin_PQ_imagereg_debug.dylib
#23 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_analysis/histogram/libhistogram_debug.dylib
#24 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_analysis/image_anisotropy_map/libimage_anisotropy_map_debug.dylib
#25 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_analysis/mean_shift_center_finder/libmean_shift_center_finder_debug.dylib
#26 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_analysis/muitiscaleEnhancement/libmultiscaleEnhancement_debug.dylib
#27 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_blending/blend_multiscanstacks/libblend_multiscanstacks_debug.dylib
#28 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_edge_detection/Edge_Extraction_from_Mask_Image/libedge_of_maskimg_debug.dylib
#29 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_filters/anisotropic_filter/anisodiff_general/libanisodiff_debug.dylib
#30 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_filters/anisotropic_filter/anisodiff_littlequick/libanisodiff_littlequick_debug.dylib
#31 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_filters/Fast_Distance_Transform/libfast_dt_debug.dylib
#32 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_filters/Gaussian_Filter/libgaussianfilter_debug.dylib
#33 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_filters/Grayscale_Image_Distance_Transform/libgsdt_debug.dylib
#34 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_filters/Laplacian_Filter/liblaplacianfilter_debug.dylib
#35 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_filters/median_filter/libmedianfilter_debug.dylib
#36 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_filters/min_Max_Filter/libminMaxfilter_debug.dylib
#37 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_geometry/crop3d_image_series/libcropped3DImageSeries_debug.dylib
#38 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_geometry/extract_Z_Slices/libextractZSlices_debug.dylib
#39 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_geometry/image_resample/libresampleimage_debug.dylib
#40 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_geometry/Montage_All_Z_Sections/libmontage_image_sections_debug.dylib
#41 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_geometry/ReCenter_Image/librecenterimage_debug.dylib
#42 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_geometry/Rotate_Image/librotateimg90_debug.dylib
#43 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_projection/maximum_intensity_projection_Image_Series/libmipImageSeries_debug.dylib
#44 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_projection/maximum_intensity_projection_Z_Slices/libmipZSlices_debug.dylib
#45 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_registration/alignment_affine_TPS_warp/libplugin_warp_affin_tps_debug.dylib
#46 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_registration/brainaligner/libbrainaligner_debug.dylib
#47 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_registration/littleQuickWarp/liblittlequickwarp_debug.dylib
#48 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_registration/pointcloud_matcher/libplugin_pointcloud_match_debug.dylib
#49 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_resolution/XYZ_Resolution/libexample_reset_xyz_resolution_debug.dylib
#50 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_ROI/ROI_Editor/libroi_editor_debug.dylib
#51 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_segmentation/Cell_Segmentation_GVF/libgvf_cellseg_debug.dylib
#52 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_segmentation/Label_Objects/libregiongrow_debug.dylib
#53 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/image_thresholding/Simple_Adaptive_Thresholding/libada_threshold_debug.dylib
#54 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/linker_file/Linker_File_Generator/liblinker_file_generator_debug.dylib
#55 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/linker_file/Save_3Dviewer_Content_to_Linker_File/libsave3dviewer2linker_debug.dylib
#56 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/marker_utilities/marker2others/libmarker2others_debug.dylib
#57 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/marker_utilities/markers_to_minimum_spanning_tree/libmarker2mst_debug.dylib
#58 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/misc/combine_file/libcombine_file_debug.dylib
#59 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/misc/paint/libpaint_debug.dylib
#60 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/movies_and_snapshots/Movie_Converter/libmovie_format_convert_debug.dylib
#61 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/movies_and_snapshots/Simple_Movie_Maker/libmoviefrom3dviewer_debug.dylib
#62 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/movies_and_snapshots/snapshots_3dviewer/libsnapshots_3dviewer_debug.dylib
#63 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/movies_and_snapshots/ZMovieMaker/libZMovieMaker_debug.dylib
#64 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_stitch/1_stitchers/libneuron_stitch_debug.dylib
#65 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_stitch/2_search_border_tips/libsearch_border_tips_debug.dylib
#66 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_stitch/3_file_transform/libfile_transform_debug.dylib
#67 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_stitch/4_file_combine/libfile_combine_debug.dylib
#68 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_toolbox/libneuron_toolbox_debug.dylib
#69 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/Advantra/libAdvantra_debug.dylib
#70 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/BJUT_fastmarching_spanningtree/libfastmarching_spanningtree_debug.dylib
#71 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/BJUT_meanshift/libmeanshift_debug.dylib
#72 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/CWlab_method1_version1/libCWlab_method1_version1_debug.dylib
#73 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/EnsembleNeuronTracerBasic/libEnsembleNeuronTracerBasic_debug.dylib
#74 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/EnsembleNeuronTracerV2n/libEnsembleNeuronTracerV2n_debug.dylib
#75 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/EnsembleNeuronTracerV2s/libEnsembleNeuronTracerV2s_debug.dylib
#76 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/ENT/libENT_debug.dylib
#77 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/HUST_NeuroGPSTree/libNeuroGPSTree_debug.dylib
#78 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/MOST_tracing/libmostVesselTracer_debug.dylib
#79 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/MST_tracing/libneurontracing_mst_debug.dylib
#80 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/nctuTW/libnctuTW_debug.dylib
#81 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/NeuronChaser/libNeuronChaser_debug.dylib
#82 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/NeuroStalker/libNeuroStalker_debug.dylib
#83 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/neutu_autotrace/libneutu_autotrace_debug.dylib
#84 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/neuTube/libneuTube_debug.dylib
#85 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/PSF_tracing/libPSF_zhi_debug.dylib
#86 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/Rivulet/libRivulet_debug.dylib
#87 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/SIGEN/libSIGEN.dylib
#88 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/SimpleAxisAnalyzer/libSimpleAxisAnalyzer_debug.dylib
#89 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/SimpleTracing/libSimpleTracing_debug.dylib
#90 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/smartTrace/libsmartTrace_debug.dylib
#91 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/tips_GD/libtips_GD_debug.dylib
#92 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/TReMap/libneurontracing_mip_debug.dylib
#93 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/Vaa3D-FarSight_snake_tracing/libsnake_tracing_debug.dylib
#94 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_tracing/Vaa3D_Neuron2/libvn2_debug.dylib
#95 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/affine_transform_swc/libaffine_transform_swc_debug.dylib
#96 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/blastneuron/libblastneuron_debug.dylib
#97 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/calculate_reliability_score/libcalculate_reliability_score_debug.dylib
#98 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/color_render_ESWC_features/libcolor_render_ESWC_features_debug.dylib
#99 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/consensus_skeleton_via_clustering/libconsensus_skeleton_debug.dylib
#100 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/Enhanced_SWC_Format_Converter/libeswc_converter_debug.dylib
#101 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/global_neuron_feature/libglobal_neuron_feature_debug.dylib
#102 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/hierarchical_labeling_of_neuron/libhier_label_debug.dylib
#103 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/inter_node_pruning/libinter_node_pruning_debug.dylib
#104 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/N3DFix/libN3DFix_debug.dylib
#105 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/neuron_color_display/libneuron_color_display_debug.dylib
#106 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/neuron_color_seperator/libneuron_color_seperator_debug.dylib
#107 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/neuron_connector/libneuron_connector_debug.dylib
#108 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/neuron_distance/libneuron_dist_debug.dylib
#109 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/neuron_fragment_extractor/libneuron_fragment_extractor_debug.dylib
#110 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/neuron_image_profiling/libneuron_image_profiling_debug.dylib
#111 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/neuron_radius/libneuron_radius_debug.dylib
#112 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/node_connect/libnode_connect_debug.dylib
#113 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/pruning_swc_simple/libpruning_swc_debug.dylib
#114 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/resample_swc/libresample_swc_debug.dylib
#115 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/sort_neuron_swc/libsort_neuron_swc_debug.dylib
#116 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/swc_gui_resample/libSWC_Resample_debug.dylib
#117 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/swc_to_maskimage_cylinder_unit/libswc2mask_debug.dylib
#118 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/swc_to_maskimage_sphere_unit/libswc_to_maskimage_sphere_debug.dylib
#119 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/tile_display_multiple_neurons/libneuron_tile_display_debug.dylib
#120 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/neuron_utilities/typeset_childbranch/libtypeset_debug.dylib
#121 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/pixel_intensity/Canvas_Eraser/libcanvas_eraser_debug.dylib
#122 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/pixel_intensity/Change_single_pixel_value/libupdatepxlval_debug.dylib
#123 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/shape_analysis/principal_skeleton_detection/libprincipalskeleton_detection_debug.dylib
#124 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/shape_analysis/shape_extractor/libshape_extractor_debug.dylib
#125 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/Sync_Views/sync3D/libsync3D_debug.dylib
#126 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/Sync_Views/sync_z_cut/libsync_z_cut_debug.dylib
#127 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/Vaa3D_PluginInterface_Demos/3D_viewer_data_push_and_display/libex_push_debug.dylib
#128 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/Vaa3D_PluginInterface_Demos/call_each_other/libex_call_debug.dylib
#129 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/Vaa3D_PluginInterface_Demos/call_each_other/libex_matrix_debug.dylib
#130 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/Vaa3D_PluginInterface_Demos/demo_opensurfacefile/libdemo_opensurfacefile_debug.dylib
#131 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/Vaa3D_PluginInterface_Demos/mouse_event_monitor/libmouse_monitor_debug.dylib
#132 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/Vaa3D_PluginInterface_Demos/Multi_Image_Interface/libnewwindow_debug.dylib
#133 /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/plugins/Vaa3D_PluginInterface_Demos/Single_Image_Interface/libextrafilters_debug.dylib


Originally posted by Zhi Zhou:

Hi I got the same problem. I have installed the last version of Vaa3D in mu Mac OSX.12 (Sierra) and could neither run the plug-in manager nor rescan alll-plugin. As mentioned before the plugins are in the parallel folder. How can I fix the problem?
Any advice?

Hello

I have recently got myself a new computer running Sierra 10.12.5. As the other users Vaa3D cannot see the plugins. I have downloaded the latest binary release version that Zhi Zhou posted here but unfortunately this has not helped.

Running on command line I get the following:

dyld: Library not loaded: /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui
Referenced from: /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtSvg.framework/Versions/4/QtSvg
Reason: image not found
Abort trap: 6

any ideas on how to proceed?

Thanks

Lorena

I also have the problem with compiled last Vaa3d (Sierra 10.12.6)
I got error message like this

./vaa3d -h
dyld: Library not loaded: /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui
Referenced from: /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtSvg.framework/Versions/4/QtSvg
Reason: image not found
Abort trap: 6

Installations of Qt-4.7.1 and Qt-4.8.6 were failed.
I'd like to know the detail local building process by Dr. Peng

Woo-Suk Tae
Seoul, Korea

The issue was due to the latest Mac OS update. But you should be able to run it if you have the right Qt library files.

How about run the following command and let us know what you see on your machine?

>otool -L Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/MacOS/vaa3d64

On my own machine I have the following:

/usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1238.50.2)
/Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib (compatibility version 7.0.0, current version 7.0.0)
/System/Library/Frameworks/CoreServices.framework/Versions/A/CoreServices (compatibility version 1.0.0, current version 775.19.0)
/usr/local/Trolltech/Qt-4.7.1/lib/QtSvg.framework/Versions/4/QtSvg (compatibility version 4.7.0, current version 4.7.1)
/usr/local/Trolltech/Qt-4.7.1/lib/QtXml.framework/Versions/4/QtXml (compatibility version 4.7.0, current version 4.7.1)
/usr/local/Trolltech/Qt-4.7.1/lib/QtOpenGL.framework/Versions/4/QtOpenGL (compatibility version 4.7.0, current version 4.7.1)
/usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui (compatibility version 4.7.0, current version 4.7.1)
/usr/local/Trolltech/Qt-4.7.1/lib/QtNetwork.framework/Versions/4/QtNetwork (compatibility version 4.7.0, current version 4.7.1)
/usr/local/Trolltech/Qt-4.7.1/lib/QtCore.framework/Versions/4/QtCore (compatibility version 4.7.0, current version 4.7.1)
/System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL (compatibility version 1.0.0, current version 1.0.0)
/System/Library/Frameworks/AGL.framework/Versions/A/AGL (compatibility version 1.0.0, current version 1.0.0)
/usr/lib/libstdc++.6.dylib (compatibility version 7.0.0, current version 104.1.0)
/usr/lib/libgcc_s.1.dylib (compatibility version 1.0.0, current version 489.0.0)
/System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation (compatibility version 150.0.0, current version 1349.64.0)


If you see sth missing, that (those) will be the files you need to install/add to your system.

-Hanchuan


Originally posted by Woo-Suk Tae:

I am attaching an experimental build of the latest version v3.400 for Mac OSX 10.12. Please unzip to the folder /Applications/vaa3d_3400 and test. If it comes with exactly 129 plugins in the plugin manager, then our solution works for 10.12 and we will do a formal release asap.

-Hanchuan

http://vaa3d.org


Originally posted by Hanchuan Peng:

You may also try this dmg file

http://home.penglab.com/tmp/vaa3d_3400.dmg

After the file has been downloaded, open it and drag and drop the content to /Applications

Then vaa3d program will be in the vaa3d_3400 folder under /Applications . Double click the vaa3d64.app there and you should have 112~129 plugins depending on your OSX versions.

If this works, let us know and we will fine tune and make a formal binary release.


-Hanchuan

Originally posted by Hanchuan Peng:

See the solution below:


~~~~~~~~~~
From your file it has many lines like this:

/Applications/vaa3d/plugins/_Vaa3D_plugin_creator/libplugin_creator_debug.dylib: ): "/Applications/vaa3d/plugins/_Vaa3D_plugin_creator/libplugin_creator_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d/plugins/AllenApps/neuron_populator/libNeuronPopulator_debug.dylib: (dlopen(/Applications/vaa3d/plugins/AllenApps/neuron_populator/libNeuronPopulator_debug.dylib, 5): Library not loaded: /Applications/vaa3d_3400/vaa3d64.app/Contents/Frameworks/QtGui.framework/Versions/4/QtGui
This means that you must have installed Vaa3D as /Applications/vaa3d instead of what I said last time which should be /Applications/vaa3d_3400 . Can you change the folder name to vaa3d_3400 and retry?

~~~~~~~~~~~~~~~~~~~~
On Sat, Aug 12, 2017 at 6:37 PM, Zhang, Wei wrote:
Hi Hanchuan,
Here's the text after running the terminal. Many thanks!
Best,
Wei
2017-08-12 21:31 GMT+08:00 Hanchuan Peng :
> Wei,
>
> Can you send me a screen shot when you go to a Terminal and run the
> following command:
>
> /Applications/vaa3d_3400/vaa3d64.app/Contents/MacOS/vaa3d64 -h
>
> You can send me the info you see on your Terminal.
>
> Best,
> -Hanchuan
>
> ~~~~~~~~~~~~~~~~~~~~
> Hanchuan Peng, Ph.D.
> http://penglab.com
> http://vaa3d.org
> http://bigneuron.org
> ~~~~~~~~~~~~~~~~~~~~
>
> On Sat, Aug 12, 2017 at 2:37 AM, Zhang, Wei wrote:
>>
>> Hi Hanchuan,
>>
>> Sorry to bother you again. We finally download the 3400 version after
>> many tries. However, it seems not working on my Mac 10.12.6. The
>> plugins are not showing up in the vaa3D GUI. Do you have any
>> suggestion on solving this?
>>
>> Thanks!
>> Wei
>>
>>
>> 2017-08-12 15:43 GMT+08:00 Zhang, Wei :
>> > Dear Hanchuan,
>> >
>> > How are you? We are researchers at Tsinghua U at Beijing. One of my
>> > students had a problem with using plugins on MAC computer. We searched
>> > your forum and it seemed many people had seen the same issue. You
>> > suggested trying the newest version, but we were not able to download
>> > the dmg file from the link you provided:
>> > http://home.penglab.com/tmp/vaa3d_3400.d...
>> >
>> > Could you please tell us another link that might work, or share the
>> > file via Google Drive? Many many thanks!
>> >
>> > Best,
>> > Wei
>
>



Originally posted by Hanchuan Peng:

Hi Hanchuan,

I have tried the vaa3d_3400 on a new mac running sierra where the dyld was not found when installing vaa3dV3.20. The new version however runs great!

Here's the readout from the terminal before and after installing 3400

Cheers

Lorena

Apples-iMac:MacOS apple$ ./vaa3d -h
dyld: Library not loaded: /usr/local/Trolltech/Qt-4.7.1/lib/QtGui.framework/Versions/4/QtGui
Referenced from: /Applications/Vaa3d_V3.20_MacOSX10.9_64bit/Vaa3d.app/Contents/Frameworks/QtSvg.framework/Versions/4/QtSvg
Reason: image not found
Abort trap: 6
Apples-iMac:MacOS apple$ cd
Apples-iMac:~ apple$ cd /Applications/vaa3d_3400/vaa3d64.app/Contents/MacOS
Apples-iMac:MacOS apple$ ./vaa3d64 -h
[./vaa3d64]
[-h]

Vaa3D: a 3D image visualization and analysis platform developed by Hanchuan Peng and colleagues.
Usage: v3d -h -M moduleCode [all other options specific to different modules]
-h/H help information.
-i open single or multiple image (.tif/.tiff, .lsm, .mrc, .raw/.v3draw) / object (.ano, .apo, .swc, .marker) files
-o indicates single or multiple outputs
-x a string indicates the full path or a unique partial path of a dll (for a plugin) to be launched.
-m a string indicates which menu of a plugin will be called.
-f a string indicates which function of a plugin will be called.
-p a string indicates parameters that plugin function use
-pf a string read from configuration file indicates parameters that plugin function use
-v force to open a 3d viewer when loading an image, otherwise use the default v3d global setting (from "Adjust Preference")
-na open NeuronAnnotator work-mode directly
-cmd [headless command-line arguments, intended for compute grid use. Try '-cmd -h' for more information on this option]
Searching in ./plugins ......
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/FlyWorkstation_utilities/Janelia_blend_multiscanstacks/libJanelia_blend_multiscanstacks_debug.dylib: ): "/Applications/vaa3d_3400/plugins/FlyWorkstation_utilities/Janelia_blend_multiscanstacks/libJanelia_blend_multiscanstacks_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/FlyWorkstation_utilities/Janelia_clonalSelect/libJanelia_clonalSelect_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/FlyWorkstation_utilities/Janelia_clonalSelect/libJanelia_clonalSelect_debug.dylib, 5): Library not loaded: /Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib
Referenced from: /Applications/vaa3d_3400/plugins/FlyWorkstation_utilities/Janelia_clonalSelect/libJanelia_clonalSelect_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/FlyWorkstation_utilities/Janelia_clonalSelect/libJanelia_clonalSelect_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/FlyWorkstation_utilities/Janelia_lobeseger/libJanelia_lobeseg_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/FlyWorkstation_utilities/Janelia_lobeseger/libJanelia_lobeseg_debug.dylib, 5): Library not loaded: /Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib
Referenced from: /Applications/vaa3d_3400/plugins/FlyWorkstation_utilities/Janelia_lobeseger/libJanelia_lobeseg_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/FlyWorkstation_utilities/Janelia_lobeseger/libJanelia_lobeseg_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/image_analysis/muitiscaleEnhancement/libmultiscaleEnhancement_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/image_analysis/muitiscaleEnhancement/libmultiscaleEnhancement_debug.dylib, 5): Library not loaded: /Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib
Referenced from: /Applications/vaa3d_3400/plugins/image_analysis/muitiscaleEnhancement/libmultiscaleEnhancement_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/image_analysis/muitiscaleEnhancement/libmultiscaleEnhancement_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/image_filters/anisotropic_filter/anisodiff_general/libanisodiff_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/image_filters/anisotropic_filter/anisodiff_general/libanisodiff_debug.dylib, 5): Library not loaded: /Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib
Referenced from: /Applications/vaa3d_3400/plugins/image_filters/anisotropic_filter/anisodiff_general/libanisodiff_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/image_filters/anisotropic_filter/anisodiff_general/libanisodiff_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/image_filters/anisotropic_filter/anisodiff_littlequick/libanisodiff_littlequick_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/image_filters/anisotropic_filter/anisodiff_littlequick/libanisodiff_littlequick_debug.dylib, 5): Library not loaded: /Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib
Referenced from: /Applications/vaa3d_3400/plugins/image_filters/anisotropic_filter/anisodiff_littlequick/libanisodiff_littlequick_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/image_filters/anisotropic_filter/anisodiff_littlequick/libanisodiff_littlequick_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/image_geometry/crop3d_image_series/libcropped3DImageSeries_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/image_geometry/crop3d_image_series/libcropped3DImageSeries_debug.dylib, 5): Library not loaded: /Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib
Referenced from: /Applications/vaa3d_3400/plugins/image_geometry/crop3d_image_series/libcropped3DImageSeries_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/image_geometry/crop3d_image_series/libcropped3DImageSeries_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/image_registration/brainaligner/libbrainaligner_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/image_registration/brainaligner/libbrainaligner_debug.dylib, 5): Library not loaded: /Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib
Referenced from: /Applications/vaa3d_3400/plugins/image_registration/brainaligner/libbrainaligner_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/image_registration/brainaligner/libbrainaligner_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/image_registration/littleQuickWarp/liblittlequickwarp_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/image_registration/littleQuickWarp/liblittlequickwarp_debug.dylib, 5): Library not loaded: /Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib
Referenced from: /Applications/vaa3d_3400/plugins/image_registration/littleQuickWarp/liblittlequickwarp_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/image_registration/littleQuickWarp/liblittlequickwarp_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/neuron_tracing/BJUT_meanshift/libmeanshift_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/neuron_tracing/BJUT_meanshift/libmeanshift_debug.dylib, 5): Library not loaded: /Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib
Referenced from: /Applications/vaa3d_3400/plugins/neuron_tracing/BJUT_meanshift/libmeanshift_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/neuron_tracing/BJUT_meanshift/libmeanshift_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/neuron_tracing/MOST_tracing/libmostVesselTracer_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/neuron_tracing/MOST_tracing/libmostVesselTracer_debug.dylib, 5): Library not loaded: /usr/local/Trolltech/Qt-4.7.1/lib/QtOpenGL.framework/Versions/4/QtOpenGL
Referenced from: /Applications/vaa3d_3400/plugins/neuron_tracing/MOST_tracing/libmostVesselTracer_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/neuron_tracing/MOST_tracing/libmostVesselTracer_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/neuron_tracing/MST_tracing/libneurontracing_mst_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/neuron_tracing/MST_tracing/libneurontracing_mst_debug.dylib, 5): Library not loaded: /Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib
Referenced from: /Applications/vaa3d_3400/plugins/neuron_tracing/MST_tracing/libneurontracing_mst_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/neuron_tracing/MST_tracing/libneurontracing_mst_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/neuron_tracing/NeuroStalker/libNeuroStalker_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/neuron_tracing/NeuroStalker/libNeuroStalker_debug.dylib, 5): Library not loaded: /Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib
Referenced from: /Applications/vaa3d_3400/plugins/neuron_tracing/NeuroStalker/libNeuroStalker_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/neuron_tracing/NeuroStalker/libNeuroStalker_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/neuron_tracing/Rivulet2/libRivulet_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/neuron_tracing/Rivulet2/libRivulet_debug.dylib, 5): Library not loaded: /Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib
Referenced from: /Applications/vaa3d_3400/plugins/neuron_tracing/Rivulet2/libRivulet_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/neuron_tracing/Rivulet2/libRivulet_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/neuron_tracing/smartTrace/libsmartTrace_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/neuron_tracing/smartTrace/libsmartTrace_debug.dylib, 5): Library not loaded: /Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib
Referenced from: /Applications/vaa3d_3400/plugins/neuron_tracing/smartTrace/libsmartTrace_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/neuron_tracing/smartTrace/libsmartTrace_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/neuron_tracing/tips_GD/libtips_GD_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/neuron_tracing/tips_GD/libtips_GD_debug.dylib, 5): Library not loaded: /Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib
Referenced from: /Applications/vaa3d_3400/plugins/neuron_tracing/tips_GD/libtips_GD_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/neuron_tracing/tips_GD/libtips_GD_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/neuron_utilities/assemble_neuron_live/libassemble_neuron_live_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/neuron_utilities/assemble_neuron_live/libassemble_neuron_live_debug.dylib, 5): Library not loaded: /Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib
Referenced from: /Applications/vaa3d_3400/plugins/neuron_utilities/assemble_neuron_live/libassemble_neuron_live_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/neuron_utilities/assemble_neuron_live/libassemble_neuron_live_debug.dylib"
Fail instantiation( Cannot load library /Applications/vaa3d_3400/plugins/neuron_utilities/calculate_reliability_score/libcalculate_reliability_score_debug.dylib: (dlopen(/Applications/vaa3d_3400/plugins/neuron_utilities/calculate_reliability_score/libcalculate_reliability_score_debug.dylib, 5): Library not loaded: /Users/hanchuanp/work/github/v3d_external/v3d_main/common_lib/lib/libtiff.5.dylib
Referenced from: /Applications/vaa3d_3400/plugins/neuron_utilities/calculate_reliability_score/libcalculate_reliability_score_debug.dylib
Reason: image not found) ): "/Applications/vaa3d_3400/plugins/neuron_utilities/calculate_reliability_score/libcalculate_reliability_score_debug.dylib"
Searching ./plugins done.
Found [112] plugins
#1 /Applications/vaa3d_3400/plugins/_Vaa3D_plugin_creator/libplugin_creator_debug.dylib
#2 /Applications/vaa3d_3400/plugins/AllenApps/neuron_populator/libNeuronPopulator_debug.dylib
#3 /Applications/vaa3d_3400/plugins/celegans/atlasguided_seganno/libplugin_atlasguided_stranno_partial_debug.dylib
#4 /Applications/vaa3d_3400/plugins/celegans/celegans_straighten/libcelegans_straighten_debug.dylib
#5 /Applications/vaa3d_3400/plugins/cell_counting/quickFind/libcellSegmentation_debug.dylib
#6 /Applications/vaa3d_3400/plugins/color_channel/split_extract_channels/libchannelsplit_debug.dylib
#7 /Applications/vaa3d_3400/plugins/data_IO/convert_and_load_with_Bioformats/libbioformats_loader_debug.dylib
#8 /Applications/vaa3d_3400/plugins/data_IO/convert_file_format/libconvert_file_format_debug.dylib
#9 /Applications/vaa3d_3400/plugins/data_IO/convert_Neurolucida_ASC_file_to_SWC/libconvert_Neurolucida_ASC_file_to_SWC_debug.dylib
#10 /Applications/vaa3d_3400/plugins/data_IO/NIFTI_file_reader/libNifTi_reader_debug.dylib
#11 /Applications/vaa3d_3400/plugins/data_IO/save_Z_Slices/libsaveZSlices_debug.dylib
#12 /Applications/vaa3d_3400/plugins/data_type/5D_Stack_Converter/libmovieZCswitch_debug.dylib
#13 /Applications/vaa3d_3400/plugins/data_type/Convert_8_16_32_bits_data/libdatatypeconvert_debug.dylib
#14 /Applications/vaa3d_3400/plugins/data_type/Convert_Image_to_AtlasViewMode/libconvert_img_to_atlasview_debug.dylib
#15 /Applications/vaa3d_3400/plugins/data_type/intensity_rescale/librescale_debug.dylib
#16 /Applications/vaa3d_3400/plugins/FlyWorkstation_utilities/Janelia_ifusion/libJanelia_ifusion_debug.dylib
#17 /Applications/vaa3d_3400/plugins/FlyWorkstation_utilities/Janelia_istitch/libJanelia_imageStitch_debug.dylib
#18 /Applications/vaa3d_3400/plugins/FlyWorkstation_utilities/Janelia_refExtract/libJanelia_refExtract_debug.dylib
#19 /Applications/vaa3d_3400/plugins/FlyWorkstation_utilities/Janelia_SSD_registration/libJanelia_plugin_PQ_imagereg_debug.dylib
#20 /Applications/vaa3d_3400/plugins/image_analysis/histogram/libhistogram_debug.dylib
#21 /Applications/vaa3d_3400/plugins/image_analysis/image_anisotropy_map/libimage_anisotropy_map_debug.dylib
#22 /Applications/vaa3d_3400/plugins/image_analysis/mean_shift_center_finder/libmean_shift_center_finder_debug.dylib
#23 /Applications/vaa3d_3400/plugins/image_blending/blend_multiscanstacks/libblend_multiscanstacks_debug.dylib
#24 /Applications/vaa3d_3400/plugins/image_edge_detection/Edge_Extraction_from_Mask_Image/libedge_of_maskimg_debug.dylib
#25 /Applications/vaa3d_3400/plugins/image_filters/Fast_Distance_Transform/libfast_dt_debug.dylib
#26 /Applications/vaa3d_3400/plugins/image_filters/Gaussian_Filter/libgaussianfilter_debug.dylib
#27 /Applications/vaa3d_3400/plugins/image_filters/Grayscale_Image_Distance_Transform/libgsdt_debug.dylib
#28 /Applications/vaa3d_3400/plugins/image_filters/Laplacian_Filter/liblaplacianfilter_debug.dylib
#29 /Applications/vaa3d_3400/plugins/image_filters/median_filter/libmedianfilter_debug.dylib
#30 /Applications/vaa3d_3400/plugins/image_filters/min_Max_Filter/libminMaxfilter_debug.dylib
#31 /Applications/vaa3d_3400/plugins/image_geometry/extract_Z_Slices/libextractZSlices_debug.dylib
#32 /Applications/vaa3d_3400/plugins/image_geometry/image_resample/libresampleimage_debug.dylib
#33 /Applications/vaa3d_3400/plugins/image_geometry/Montage_All_Z_Sections/libmontage_image_sections_debug.dylib
#34 /Applications/vaa3d_3400/plugins/image_geometry/ReCenter_Image/librecenterimage_debug.dylib
#35 /Applications/vaa3d_3400/plugins/image_geometry/Rotate_Image/librotateimg90_debug.dylib
#36 /Applications/vaa3d_3400/plugins/image_projection/maximum_intensity_projection_Image_Series/libmipImageSeries_debug.dylib
#37 /Applications/vaa3d_3400/plugins/image_projection/maximum_intensity_projection_Z_Slices/libmipZSlices_debug.dylib
#38 /Applications/vaa3d_3400/plugins/image_registration/alignment_affine_TPS_warp/libplugin_warp_affin_tps_debug.dylib
#39 /Applications/vaa3d_3400/plugins/image_registration/pointcloud_matcher/libplugin_pointcloud_match_debug.dylib
#40 /Applications/vaa3d_3400/plugins/image_resolution/XYZ_Resolution/libexample_reset_xyz_resolution_debug.dylib
#41 /Applications/vaa3d_3400/plugins/image_ROI/ROI_Editor/libroi_editor_debug.dylib
#42 /Applications/vaa3d_3400/plugins/image_segmentation/Cell_Segmentation_GVF/libgvf_cellseg_debug.dylib
#43 /Applications/vaa3d_3400/plugins/image_segmentation/Label_Objects/libregiongrow_debug.dylib
#44 /Applications/vaa3d_3400/plugins/image_thresholding/Simple_Adaptive_Thresholding/libada_threshold_debug.dylib
#45 /Applications/vaa3d_3400/plugins/linker_file/Linker_File_Generator/liblinker_file_generator_debug.dylib
#46 /Applications/vaa3d_3400/plugins/linker_file/Save_3Dviewer_Content_to_Linker_File/libsave3dviewer2linker_debug.dylib
#47 /Applications/vaa3d_3400/plugins/marker_utilities/marker2others/libmarker2others_debug.dylib
#48 /Applications/vaa3d_3400/plugins/marker_utilities/markers_to_minimum_spanning_tree/libmarker2mst_debug.dylib
#49 /Applications/vaa3d_3400/plugins/misc/combine_file/libcombine_file_debug.dylib
#50 /Applications/vaa3d_3400/plugins/misc/paint/libpaint_debug.dylib
#51 /Applications/vaa3d_3400/plugins/movies_and_snapshots/Movie_Converter/libmovie_format_convert_debug.dylib
#52 /Applications/vaa3d_3400/plugins/movies_and_snapshots/Simple_Movie_Maker/libmoviefrom3dviewer_debug.dylib
#53 /Applications/vaa3d_3400/plugins/movies_and_snapshots/snapshots_3dviewer/libsnapshots_3dviewer_debug.dylib
#54 /Applications/vaa3d_3400/plugins/movies_and_snapshots/ZMovieMaker/libZMovieMaker_debug.dylib
#55 /Applications/vaa3d_3400/plugins/neuron_stitch/1_stitchers/libneuron_stitch_debug.dylib
#56 /Applications/vaa3d_3400/plugins/neuron_stitch/2_search_border_tips/libsearch_border_tips_debug.dylib
#57 /Applications/vaa3d_3400/plugins/neuron_stitch/3_file_transform/libfile_transform_debug.dylib
#58 /Applications/vaa3d_3400/plugins/neuron_stitch/4_file_combine/libfile_combine_debug.dylib
#59 /Applications/vaa3d_3400/plugins/neuron_toolbox/libneuron_toolbox_debug.dylib
#60 /Applications/vaa3d_3400/plugins/neuron_tracing/Advantra/libAdvantra_debug.dylib
#61 /Applications/vaa3d_3400/plugins/neuron_tracing/BJUT_fastmarching_spanningtree/libfastmarching_spanningtree_debug.dylib
#62 /Applications/vaa3d_3400/plugins/neuron_tracing/CWlab_method1_version1/libCWlab_method1_version1_debug.dylib
#63 /Applications/vaa3d_3400/plugins/neuron_tracing/EnsembleNeuronTracerBasic/libEnsembleNeuronTracerBasic_debug.dylib
#64 /Applications/vaa3d_3400/plugins/neuron_tracing/EnsembleNeuronTracerV2n/libEnsembleNeuronTracerV2n_debug.dylib
#65 /Applications/vaa3d_3400/plugins/neuron_tracing/EnsembleNeuronTracerV2s/libEnsembleNeuronTracerV2s_debug.dylib
#66 /Applications/vaa3d_3400/plugins/neuron_tracing/ENT/libENT_debug.dylib
#67 /Applications/vaa3d_3400/plugins/neuron_tracing/nctuTW/libnctuTW_debug.dylib
#68 /Applications/vaa3d_3400/plugins/neuron_tracing/NeuronChaser/libNeuronChaser_debug.dylib
#69 /Applications/vaa3d_3400/plugins/neuron_tracing/neutu_autotrace/libneutu_autotrace_debug.dylib
#70 /Applications/vaa3d_3400/plugins/neuron_tracing/PSF_tracing/libPSF_zhi_debug.dylib
#71 /Applications/vaa3d_3400/plugins/neuron_tracing/SIGEN/libSIGEN.dylib
#72 /Applications/vaa3d_3400/plugins/neuron_tracing/SimpleTracing/libSimpleTracing_debug.dylib
#73 /Applications/vaa3d_3400/plugins/neuron_tracing/Vaa3D-FarSight_snake_tracing/libsnake_tracing_debug.dylib
#74 /Applications/vaa3d_3400/plugins/neuron_tracing/Vaa3D_Neuron2/libvn2_debug.dylib
#75 /Applications/vaa3d_3400/plugins/neuron_utilities/affine_transform_swc/libaffine_transform_swc_debug.dylib
#76 /Applications/vaa3d_3400/plugins/neuron_utilities/blastneuron/libblastneuron_debug.dylib
#77 /Applications/vaa3d_3400/plugins/neuron_utilities/color_render_ESWC_features/libcolor_render_ESWC_features_debug.dylib
#78 /Applications/vaa3d_3400/plugins/neuron_utilities/consensus_skeleton_via_clustering/libconsensus_skeleton_debug.dylib
#79 /Applications/vaa3d_3400/plugins/neuron_utilities/Enhanced_SWC_Format_Converter/libeswc_converter_debug.dylib
#80 /Applications/vaa3d_3400/plugins/neuron_utilities/global_neuron_feature/libglobal_neuron_feature_debug.dylib
#81 /Applications/vaa3d_3400/plugins/neuron_utilities/hierarchical_labeling_of_neuron/libhier_label_debug.dylib
#82 /Applications/vaa3d_3400/plugins/neuron_utilities/inter_node_pruning/libinter_node_pruning_debug.dylib
#83 /Applications/vaa3d_3400/plugins/neuron_utilities/N3DFix/libN3DFix_debug.dylib
#84 /Applications/vaa3d_3400/plugins/neuron_utilities/neuron_color_display/libneuron_color_display_debug.dylib
#85 /Applications/vaa3d_3400/plugins/neuron_utilities/neuron_color_seperator/libneuron_color_seperator_debug.dylib
#86 /Applications/vaa3d_3400/plugins/neuron_utilities/neuron_connector/libneuron_connector_debug.dylib
#87 /Applications/vaa3d_3400/plugins/neuron_utilities/neuron_distance/libneuron_dist_debug.dylib
#88 /Applications/vaa3d_3400/plugins/neuron_utilities/neuron_fragment_extractor/libneuron_fragment_extractor_debug.dylib
#89 /Applications/vaa3d_3400/plugins/neuron_utilities/neuron_image_profiling/libneuron_image_profiling_debug.dylib
#90 /Applications/vaa3d_3400/plugins/neuron_utilities/neuron_radius/libneuron_radius_debug.dylib
#91 /Applications/vaa3d_3400/plugins/neuron_utilities/node_connect/libnode_connect_debug.dylib
#92 /Applications/vaa3d_3400/plugins/neuron_utilities/pruning_swc_simple/libpruning_swc_debug.dylib
#93 /Applications/vaa3d_3400/plugins/neuron_utilities/resample_swc/libresample_swc_debug.dylib
#94 /Applications/vaa3d_3400/plugins/neuron_utilities/sort_neuron_swc/libsort_neuron_swc_debug.dylib
#95 /Applications/vaa3d_3400/plugins/neuron_utilities/swc_gui_resample/libSWC_Resample_debug.dylib
#96 /Applications/vaa3d_3400/plugins/neuron_utilities/swc_to_maskimage_cylinder_unit/libswc2mask_debug.dylib
#97 /Applications/vaa3d_3400/plugins/neuron_utilities/swc_to_maskimage_sphere_unit/libswc_to_maskimage_sphere_debug.dylib
#98 /Applications/vaa3d_3400/plugins/neuron_utilities/tile_display_multiple_neurons/libneuron_tile_display_debug.dylib
#99 /Applications/vaa3d_3400/plugins/neuron_utilities/typeset_childbranch/libtypeset_debug.dylib
#100 /Applications/vaa3d_3400/plugins/pixel_intensity/Canvas_Eraser/libcanvas_eraser_debug.dylib
#101 /Applications/vaa3d_3400/plugins/pixel_intensity/Change_single_pixel_value/libupdatepxlval_debug.dylib
#102 /Applications/vaa3d_3400/plugins/shape_analysis/principal_skeleton_detection/libprincipalskeleton_detection_debug.dylib
#103 /Applications/vaa3d_3400/plugins/shape_analysis/shape_extractor/libshape_extractor_debug.dylib
#104 /Applications/vaa3d_3400/plugins/Sync_Views/sync3D/libsync3D_debug.dylib
#105 /Applications/vaa3d_3400/plugins/Sync_Views/sync_z_cut/libsync_z_cut_debug.dylib
#106 /Applications/vaa3d_3400/plugins/Vaa3D_PluginInterface_Demos/3D_viewer_data_push_and_display/libex_push_debug.dylib
#107 /Applications/vaa3d_3400/plugins/Vaa3D_PluginInterface_Demos/call_each_other/libex_call_debug.dylib
#108 /Applications/vaa3d_3400/plugins/Vaa3D_PluginInterface_Demos/call_each_other/libex_matrix_debug.dylib
#109 /Applications/vaa3d_3400/plugins/Vaa3D_PluginInterface_Demos/demo_opensurfacefile/libdemo_opensurfacefile_debug.dylib
#110 /Applications/vaa3d_3400/plugins/Vaa3D_PluginInterface_Demos/mouse_event_monitor/libmouse_monitor_debug.dylib
#111 /Applications/vaa3d_3400/plugins/Vaa3D_PluginInterface_Demos/Multi_Image_Interface/libnewwindow_debug.dylib
#112 /Applications/vaa3d_3400/plugins/Vaa3D_PluginInterface_Demos/Single_Image_Interface/libextrafilters_debug.dylib
Apples-iMac:MacOS apple$

Hello, I got a bit ahead of myself there. There are only 112 plugins that appear on the terminal not 129 like you said there should be. Also, even though it now recognises the program and dyld through terminal and I get the correct response when running otool -L, when I run the GUI there are no plugins in the pull down menu, the ones in the Advanced menu get greyed out as soon as I load an image, and I can not longer drag and drop an image onto the gui (I get a file does not exist message). 

Sorry

Lorena
Originally posted by Lorena Arancibia:

Hi,

I seem to have a very similar problem on OS 10.12.6.
When I install the 3.20 from zip or 3.40 version via the dmg file to my Application folder, I can open the program but it doesn't show any Plugins and Re-Scanning Plugins also does not make a difference.

I tried to run vaa3d from the terminal (while in the vaa3d application folder)

tni107069:vaa3d_3400 joern$ ls

Icon? bioformats_tools plugins
NeuTuAuto.Params.dat mac_ffmpeg vaa3d64.app

tni107069:vaa3d_3400 joern$ vaa3d64 -h
-bash: vaa3d64: command not found


The same problem occurs when I start vaa3d64 -h from vaa3d64.app/Contents/MacOS/


And this is the readout from otool

/usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1238.50.2)
@executable_path/../Frameworks/libtiff.5.dylib (compatibility version 7.0.0, current version 7.0.0)
/System/Library/Frameworks/CoreServices.framework/Versions/A/CoreServices (compatibility version 1.0.0, current version 775.19.0)
@executable_path/../Frameworks/QtSvg.framework/Versions/4/QtSvg (compatibility version 4.7.0, current version 4.7.1)
@executable_path/../Frameworks/QtXml.framework/Versions/4/QtXml (compatibility version 4.7.0, current version 4.7.1)
@executable_path/../Frameworks/QtOpenGL.framework/Versions/4/QtOpenGL (compatibility version 4.7.0, current version 4.7.1)
@executable_path/../Frameworks/QtGui.framework/Versions/4/QtGui (compatibility version 4.7.0, current version 4.7.1)
@executable_path/../Frameworks/QtNetwork.framework/Versions/4/QtNetwork (compatibility version 4.7.0, current version 4.7.1)
@executable_path/../Frameworks/QtCore.framework/Versions/4/QtCore (compatibility version 4.7.0, current version 4.7.1)
/System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL (compatibility version 1.0.0, current version 1.0.0)
/System/Library/Frameworks/AGL.framework/Versions/A/AGL (compatibility version 1.0.0, current version 1.0.0)
/usr/lib/libstdc++.6.dylib (compatibility version 7.0.0, current version 104.1.0)
/usr/lib/libgcc_s.1.dylib (compatibility version 1.0.0, current version 489.0.0)
/System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation (compatibility version 150.0.0, current version 1349.64.0)


Any help would be greatly appreciated.


Joern

Here is an alternative solution to load all plugins if you are using binary release V3.200 on a newer macOS.

1. Right click on "Vaa3D" icon under "Vaa3d_V3.20_MacOSX10.9_64bit" folder, and select "Show Package Contents" in the pop-up menu.
2. Double click "Contents" folder under "Vaa3D" folder , and then double click "MacOS" folder under "Contents" folder.
3. Open Vaa3D by double clicking "vaa3d_script" under "MacOS" folder.

workflow: Vaa3D -----> Contents -----> MacOS -----> vaa3d_script

In this way, you should be able to see all plugins. We will try to release a new version to fix this issue. But before that, please use the above procedure to launch Vaa3D.

Cheers,

Zhi