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help > RE: Movement
Oct 1, 2014 05:10 PM | Alfonso Nieto-Castanon - Boston University
RE: Movement
Hi Brad,
Yes, entering a .mat file with your empty matrix M is exactly the way to go for those subjects/sessions without any outliers. The gui in the denoising step is (misleadingly) showing you the effect explained by *all* counfounding effects when selecting this empty regressor. This will not affect your analyses, though, and this particular gui issue has already been fixed in more recent versions of CONN (it will now show you a more explicit 'no effects available' message when attempting to view the effects explained by an empty subject/session confounding effect in the preview-results denoising window).
Hope this helps
Alfonso
Originally posted by Bradley Taber-Thomas:
Yes, entering a .mat file with your empty matrix M is exactly the way to go for those subjects/sessions without any outliers. The gui in the denoising step is (misleadingly) showing you the effect explained by *all* counfounding effects when selecting this empty regressor. This will not affect your analyses, though, and this particular gui issue has already been fixed in more recent versions of CONN (it will now show you a more explicit 'no effects available' message when attempting to view the effects explained by an empty subject/session confounding effect in the preview-results denoising window).
Hope this helps
Alfonso
Originally posted by Bradley Taber-Thomas:
Hi Alfonso,
I am entering outlier .mat files as first level covariates in a CONN analyses that I set up via a batch script. How should I handle subjects who have 0 outlier scans? Setup doesn't seem to work leaving the outlier file empty. So for subjects with 0 outliers, I have been entering a .mat file with an empty matrix M with one row per scan and no columns (M = zeros(# scans, 0); dimensions = 180x0). But that regressor appears to explain everything (screen shot attached).
Best,
Brad
I am entering outlier .mat files as first level covariates in a CONN analyses that I set up via a batch script. How should I handle subjects who have 0 outlier scans? Setup doesn't seem to work leaving the outlier file empty. So for subjects with 0 outliers, I have been entering a .mat file with an empty matrix M with one row per scan and no columns (M = zeros(# scans, 0); dimensions = 180x0). But that regressor appears to explain everything (screen shot attached).
Best,
Brad
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| Title | Author | Date |
|---|---|---|
| Kaylah Curtis | Jul 23, 2014 | |
| Mary Newsome | Apr 2, 2015 | |
| Alfonso Nieto-Castanon | Apr 6, 2015 | |
| Alfonso Nieto-Castanon | Jul 29, 2014 | |
| Xiaozhen You | Mar 31, 2015 | |
| Fred Uquillas | Mar 31, 2015 | |
| Xiaozhen You | Apr 1, 2015 | |
| Fred Uquillas | Apr 1, 2015 | |
| Alfonso Nieto-Castanon | Apr 2, 2015 | |
| Xiaozhen You | Apr 2, 2015 | |
| Ekaterina Shcheglova | Mar 26, 2023 | |
| Fred Uquillas | Apr 24, 2015 | |
| Alfonso Nieto-Castanon | Apr 28, 2015 | |
| Fred Uquillas | May 6, 2015 | |
| Arkan A | May 6, 2015 | |
| Alfonso Nieto-Castanon | May 6, 2015 | |
| Arkan A | May 7, 2015 | |
| Alfonso Nieto-Castanon | May 8, 2015 | |
| Arkan A | May 8, 2015 | |
| Bradley Taber-Thomas | Sep 30, 2014 | |
| Alfonso Nieto-Castanon | Oct 1, 2014 | |
| Bradley Taber-Thomas | Oct 1, 2014 | |
| Alfonso Nieto-Castanon | Nov 19, 2014 | |
| Kaylah Curtis | Jul 29, 2014 | |
| Alfonso Nieto-Castanon | Jul 30, 2014 | |
| Alexander Drobyshevsky | Oct 21, 2014 | |
| Alfonso Nieto-Castanon | Nov 19, 2014 | |
| Kaylah Curtis | Jul 30, 2014 | |
| Aleksandra Herman | Oct 23, 2014 | |