help > Failure to Normalize
Oct 28, 2014  03:10 PM | Michael King - University of Cape Town
Failure to Normalize
Hi 

I'm having trouble with the functional normalization step. I'm implementing the preprocessing pipeline for volume based analysis (MNI) but the last image generated in the "auSubject1.nii"

I assume that this means my image has been realigned & warped and slice timed. But since it stops at normalization, the following steps do not occur. I've included the error is below. You'll see a smoothing error as well but that is, I guess, only present since I was also trying to run smoothing after functional normalization. I am using the newest version of Conn 14.n

Best,
Michael


Running 'Normalise: Estimate & Write'
Smoothing by 0 & 8mm..
Failed 'Normalise: Estimate & Write'
Field reference for multiple structure elements that is followed by more reference blocks is an error.
In file "/Users/Michael/Documents/MATLAB/spm8/spm_smoothto8bit.m" (v4310), function "smoothto8bit" at line 33.
In file "/Users/Michael/Documents/MATLAB/spm8/spm_smoothto8bit.m" (v4310), function "spm_smoothto8bit" at line 16.
In file "/Users/Michael/Documents/MATLAB/spm8/spm_normalise.m" (v4621), function "spm_normalise" at line 153.
In file "/Users/Michael/Documents/MATLAB/spm8/config/spm_run_normalise_estwrite.m" (v4152), function "spm_run_normalise_estwrite" at line 22.

The following modules did not run:
Failed: Normalise: Estimate & Write

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TitleAuthorDate
Failure to Normalize
Michael King Oct 28, 2014
Michael King Nov 25, 2014
Alfonso Nieto-Castanon Nov 26, 2014
Alfonso Nieto-Castanon Nov 15, 2014
Michael King Nov 16, 2014
Michael King Nov 16, 2014
Alfonso Nieto-Castanon Nov 17, 2014
Michael King Nov 17, 2014
Alfonso Nieto-Castanon Nov 19, 2014
Michael King Nov 20, 2014
Alfonso Nieto-Castanon Nov 21, 2014
Michael King Nov 22, 2014
Alfonso Nieto-Castanon Nov 23, 2014
Michael King Nov 23, 2014