help > StatNonParamTestPDM erro
Mar 26, 2015  04:03 PM | Mojdeh Zamyadi
StatNonParamTestPDM erro
Hi all,

I'm trying to run StatNonParamTestPDM and I get the following error:
.....
Error while reading number, encountering non-number on line 103 feature: 3 numChar : 0
Error while reading number, encountering non-number on line 103 feature: 3 numChar : 0
Error while reading number, encountering non-number on line 103 feature: 3 numChar : 0
Error while reading number, encountering non-number on line 103 feature: 3 numChar : 0
data has been relabeled: -1 --> 0 ; -1 --> 1
#A: 104, #B: 0
tupel: 1 , numFeatures: 0
group sizes: 104/0 = 104
Features : 0 , real: 0
.Segmentation fault (core dumped)

I use the following command:

./StatNonParamTestPDM /data/hippocampus_shape_analysis/ShapeAnalysis_results_LH_minus2/Stats/meshList.txt -out /data/hippocampus_shape_analysis/ShapeAnalysis_results_LH_minus2/Stats/first_StatNonParamTestPDM_result -numPerms 20000 -signLevel 0.05 -signSteps 1000 -v

I've used the latest Shape Analysis extension in Slicer to produce .vtk files and I've converted them to .meta files as suggested here. I've followed the same format as the example given the Docs section here. This is part of my file:

#groupID scalingFactor meshfile
0 1 /data/hippocampus_shape_analysis/ShapeAnalysis_results_LH_minus2/Stats/all_meshes/C76_LH_pp_surfSPHARM_procalign.meta
0 1 /data/hippocampus_shape_analysis/ShapeAnalysis_results_LH_minus2/Stats/all_meshes/C77_LH_pp_surfSPHARM_procalign.meta
0 1 /data/hippocampus_shape_analysis/ShapeAnalysis_results_LH_minus2/Stats/all_meshes/C78_LH_pp_surfSPHARM_procalign.meta
0 1 /data/hippocampus_shape_analysis/ShapeAnalysis_results_LH_minus2/Stats/all_meshes/C79_LH_pp_surfSPHARM_procalign.meta
1 1 /data/hippocampus_shape_analysis/ShapeAnalysis_results_LH_minus2/Stats/all_meshes/NPI001_LH_pp_surfSPHARM_procalign.meta
1 1 /data/hippocampus_shape_analysis/ShapeAnalysis_results_LH_minus2/Stats/all_meshes/NPI002_LH_pp_surfSPHARM_procalign.meta
1 1 /data/hippocampus_shape_analysis/ShapeAnalysis_results_LH_minus2/Stats/all_meshes/NPI003_LH_pp_surfSPHARM_procalign.meta
1 1 /data/hippocampus_shape_analysis/ShapeAnalysis_results_LH_minus2/Stats/all_meshes/NPI004_LH_pp_surfSPHARM_procalign.meta
1 1 /data/hippocampus_shape_analysis/ShapeAnalysis_results_LH_minus2/Stats/all_meshes/NPI005_LH_pp_surfSPHARM_procalign.meta

Does anyone know what might be wrong?! Thanks a lot,

-Mojdeh

Threaded View

TitleAuthorDate
StatNonParamTestPDM erro
Mojdeh Zamyadi Mar 26, 2015
Mojdeh Zamyadi Apr 6, 2015
Mojdeh Zamyadi Mar 31, 2015
Martin Styner Mar 31, 2015
Mojdeh Zamyadi Mar 31, 2015
Martin Styner Mar 31, 2015
Mojdeh Zamyadi Mar 31, 2015
Martin Styner Apr 1, 2015
Mojdeh Zamyadi Apr 2, 2015
Mojdeh Zamyadi Apr 2, 2015
Mojdeh Zamyadi Mar 30, 2015
Martin Styner Mar 30, 2015
Mojdeh Zamyadi Mar 30, 2015
Martin Styner Mar 30, 2015
Mojdeh Zamyadi Mar 30, 2015
Martin Styner Mar 30, 2015
Mojdeh Zamyadi Mar 30, 2015
Beatriz Paniagua Mar 30, 2015
Mojdeh Zamyadi Mar 30, 2015
Mojdeh Zamyadi Mar 26, 2015
Martin Styner Mar 26, 2015
Mojdeh Zamyadi Mar 27, 2015
Martin Styner Mar 27, 2015
Mojdeh Zamyadi Mar 27, 2015
Beatriz Paniagua Mar 27, 2015
Beatriz Paniagua Mar 26, 2015