Hi Elliot,

Thanks for the details messages. These lines tell of the problem:

15-Jan-2016 12:02:06 | ERROR | wfu_results_compute.m | locations of spm_getSPM and wfu_spm_getSPM8 are not the same!!! (C:\Users\Elliot\Documents\MATLAB\spm12 != C:\Users\Elliot\Documents\MATLAB\spm12\toolbox\wfu_pickatlas)
15-Jan-2016 12:02:06 | ERROR | wfu_results_compute.m | locations of spm_getSPM and wfu_spm_getSPM8 are not the same!!! (C:\Users\Elliot\Documents\MATLAB\spm12 != C:\Users\Elliot\Documents\MATLAB\spm12\toolbox\wfu_pickatlas)

Your SPM12 installation is listed in a higher precedence than the PickAtlas. I would use the pathtool and move pickatlas and its directories to the top.

Please let me know if you continue to have problems,
Ben