Hello,

I am using CMTK 3.3 on Windows 10. I am trying to run the following registration using the reference image Ref.nrrd and the image to be registered tERK_RegTest.nrrd. I am using a bat file with the following command: "registration --initxlate --dofs 6,9 --auto-multi-levels 4 -o affine11to8.xform Ref.nrrd tERK_RegTest.nrrd"

The images are in the same folder as the bat file, so the directory is correct, but when I run this code I get the error "Could not find file Ref.nrrd".

Has anyone seen this error before? I have little experience with the Windows command line, I would very much appreciate some help on this.

Thanks very much!