help > RE: DICOM to NIFTI
May 25, 2017  08:05 PM | Peter Stiers - Maastricht University, Faculty of Psychology and Neuroscience
RE: DICOM to NIFTI
Hi,
 
This is probably a T1 weighted anatomical image -- which are usually not acquired in the standard orientation (axial slices). MRIcron generates two additional copies of the volume, prefixed by '0', meaning that it is re-oriented to standard space, and 'co', meaning that it is additonally clipped to have an image with considerable amount of not brain volume cut out. You can use any of the three for further processing, but the re-oriented one is preferable, since many preprocessing packages assume a standard oriented image.
 
Best regards,
 
Peter
 

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TitleAuthorDate
Gyan Raj Koirala May 24, 2017
RE: DICOM to NIFTI
Peter Stiers May 25, 2017