config.h [code] | |
dwi_normalize.cc | Implements functions of dwi_normalize.h |
dwi_normalize.h [code] | Contains function for preprocessing of DW Data |
fiber.h [code] | Description of a fiber |
filter_model.cc | Implements functions defined in filter_model.h |
filter_model.h [code] | Contains all of the model reconstructions |
ISignalData.h [code] | Contains interface for signal data. Currently implemented by NrrdData.* using teem |
linalg.h [code] | Contains commonly used definitions and functions for linear algebra in 3 dimensions |
LU_solver.h [code] | Two algorithms for calculating the LU decomposition of a matrix, and solving a linear system |
mainpage.h [code] | |
math_utilities.h [code] | Implements some math functions needed in various parts of the code |
NrrdData.cc | Implementation of NrrdData.h |
NrrdData.h [code] | Contains an implementation of ISignalData using the teem library |
QuadProg++_vnl.cc | Implementation of QuadProg++_vnl.h |
QuadProg++_vnl.h [code] | Quadratic Programming library |
QuadProg++_vnl.hh [code] | Quadratic Programming library |
seed.cc | Implementation of seed.h |
seed.h [code] | Contains data structure for storing seed point information |
thread.cc | Implementation of thread.h |
thread.h [code] | Contains the functions that deal with the distribution of the threads for mutli-threaded execution |
timer.cc | Implementation of timer.h |
timer.h [code] | Contains class definition for displaying the progress bar in the console |
tractography.cc | Implementation of tractography.h |
tractography.h [code] | Contains the Class Tractography, which contains the functions that deal with the actual tracing of the fibers for each model |
UKFTractography.cxx | Main file of the project |
unscented_kalman_filter.cc | Implementation of unscented_kalman_filter.h |
unscented_kalman_filter.h [code] | The implementation of the unscented Kalman Filter The C++ implementation of the unscented Kalman Filter (UKF) with the option to run with constraints |
utilities.cc | Implementation of utilities.h |
utilities.h [code] | Calculation of frequently used (fa,ga,curve_radius) defined in this file |
vtk_writer.cc | Implementation of vtk_writer.h |
vtk_writer.h [code] | Fiber writing functionality |