[Camino-users] tractography error

Curci Marina Carmela marina.curci at epfl.ch
Thu Jun 28 06:32:16 PDT 2012


Hello to everyone!!
I'm using Camino to do tractography.
I did a lot of tests to learn how to use it, but today I have an error that I've never had during deterministic tractography. It seems that there are 9411 seeds in the voxel instead of 9416.


track -inputfile tensor.Bdouble -inputmodel dt -header DTI.nii.gz -seedfile bin_reduc_seedROI_8.nii.gz -outputfile tracks_bin8.Bfloatt
Jun 28, 2012 3:26:53 PM apps.StreamlineTractography initVariables
INFO: Defining input physical space from DTI.nii.gz
Jun 28, 2012 3:26:53 PM imaging.ImageHeader sameDimensions
INFO: Data dimensions differ between bin_reduc_seedROI_8.nii.gz and DTI.nii.gz
Processing ROI 1 of 1
Processing seed 9411 of 9416

Exception in thread "main" java.lang.ArrayIndexOutOfBoundsException: 34
	at tractography.TractographyImage.numberOfPDs(TractographyImage.java:155)
	at apps.StreamlineTractography.execute(StreamlineTractography.java:891)
	at apps.EntryPoint.main(EntryPoint.java:275)

How could I solve this problem please?
It is very urgent, please!!
Thank you very much,
Marina


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