<div dir="ltr">Yep, I forgot to add the website, it was exactly this one, but the format of the output for the "linrecon" function is not included, so the format of the ODF is not as much detailed as the rest of functions.<br>
<br><div style>I'll check the voxel2image in any case, thanks!</div></div><div class="gmail_extra"><br><br><div class="gmail_quote">2013/4/19 Philip A Cook <span dir="ltr"><<a href="mailto:cookpa@mail.med.upenn.edu" target="_blank">cookpa@mail.med.upenn.edu</a>></span><br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div style="word-wrap:break-word"><div>Here's some more information</div><div><br></div><div><a href="http://cmic.cs.ucl.ac.uk/camino//index.php?n=Main.Fileformats" target="_blank">http://cmic.cs.ucl.ac.uk/camino//index.php?n=Main.Fileformats</a></div>
<div><br></div><div>You can use voxel2image to convert multi-componennt data to a series of 3D nii images for visualization. </div><div><br></div><div><br></div><div><br></div><div><div><div><div class="h5"><div>On Apr 19, 2013, at 9:58 AM, José Luis Martín Egido wrote:</div>
<br></div></div><blockquote type="cite"><div><div class="h5"><div dir="ltr">Hello colleagues,<div><br></div><div>I have used these commands to generate the spherical harmonic ODF representation.</div><div> </div><div><span style="line-height:19px;font-size:15px;font-family:Arial,Helvetica,sans-serif"><code style="font-size:0.9em;font-family:'Lucida Console','Andale Mono','Courier New',Courier,monospace">qballmx -schemefile pigBrain.scheme -basistype sh -order 4 > qballMatrix.Bdouble</code></span></div>
<div><span style="line-height:19px;font-size:15px;font-family:Arial,Helvetica,sans-serif"><code></code><font face="'Lucida Console', 'Andale Mono', 'Courier New', Courier, monospace" size="4"><span style="font-size:14px"><br>
</span></font><code style="font-size:0.9em;font-family:'Lucida Console','Andale Mono','Courier New',Courier,monospace">linrecon pigBrain.Bfloat pigBrain.scheme qballMatrix.Bdouble -normalize -bgthresh 200 > pigBrainODFs.Bdouble</code></span><br>
</div><div><span style="line-height:19px;font-size:15px;font-family:Arial,Helvetica,sans-serif"><code style="font-size:0.9em;font-family:'Lucida Console','Andale Mono','Courier New',Courier,monospace"><br>
</code></span></div><div><span style="line-height:19px;font-size:15px;font-family:Arial,Helvetica,sans-serif"><code style="font-size:0.9em;font-family:'Lucida Console','Andale Mono','Courier New',Courier,monospace">Apparently, the results are alright, but since I want to convert this "</code></span><span style="line-height:19px;font-size:14px;font-family:'Lucida Console','Andale Mono','Courier New',Courier,monospace">pigBrainODFs.Bdouble" to nifti, I'd like to know what is the format of the generated ODF.</span></div>
<div><span style="line-height:19px;font-size:14px;font-family:'Lucida Console','Andale Mono','Courier New',Courier,monospace"><br></span></div><div><font face="'Lucida Console', 'Andale Mono', 'Courier New', Courier, monospace" size="4"><span style="font-size:14px;line-height:19px">I checked this website, and I'm looking for similar explanations as this website has for other formats.</span></font></div>
<div><font face="'Lucida Console', 'Andale Mono', 'Courier New', Courier, monospace" size="4"><span style="font-size:14px;line-height:19px"><br>
</span></font></div><div><font face="'Lucida Console', 'Andale Mono', 'Courier New', Courier, monospace" size="4"><span style="font-size:14px;line-height:19px">Any kind of help will be welcome.</span></font></div>
<div><font face="'Lucida Console', 'Andale Mono', 'Courier New', Courier, monospace" size="4"><span style="font-size:14px;line-height:19px"><br>
</span></font></div><div><font face="'Lucida Console', 'Andale Mono', 'Courier New', Courier, monospace" size="4"><span style="font-size:14px;line-height:19px">Best regards,</span></font></div>
<div><font face="'Lucida Console', 'Andale Mono', 'Courier New', Courier, monospace" size="4"><span style="font-size:14px;line-height:19px"><br>
</span></font></div><div><font face="'Lucida Console', 'Andale Mono', 'Courier New', Courier, monospace" size="4"><span style="font-size:14px;line-height:19px">José Luis</span></font></div>
<div><br></div></div></div></div>
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</blockquote></div><br></div></div></blockquote></div><br><br clear="all"><div><br></div>-- <br><div dir="ltr"><p style="color:rgb(136,136,136);margin-bottom:0cm"><span style="color:rgb(51,51,255)"><font><font face="Times New Roman, serif">José Luis Martín Egido<br>
Laboratorio de Imagen Médica.</font></font></span></p><span style="color:rgb(51,51,255)"><font><font face="Times New Roman, serif">Unidad de Medicina y Cirugía Experimental.</font></font><font><font face="Times New Roman, serif"><br>
Hospital General Universitario Gregorio Marañón</font></font><font><font face="Times New Roman, serif"><br>Dr Esquerdo 46, 28007 Madrid, Spain</font></font><font><font face="Times New Roman, serif"><br>Tlf.: <a value="+34914265067" style="color:rgb(17,85,204)">91 426 50 67</a> - Ext. 17</font></font></span><br>
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