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<body class='hmmessage'><div dir='ltr'>Hi Matt <br>thank a lot! Using the new command the problem is solved.<br><br>Cheers,<br>Stefania<br><br><div><hr id="stopSpelling">From: matt.hall@ucl.ac.uk<br>To: stefania.oliviero@hotmail.it<br>CC: camino-users@www.nitrc.org<br>Subject: RE: [Camino-users] -drawcrosssection option<br>Date: Fri, 21 Feb 2014 09:25:39 +0000<br><br>
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<p class="ecxMsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D;">Hi Stephania,</span></p>
<p class="ecxMsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D;"> </span></p>
<p class="ecxMsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D;">That’s my fault, I’m afraid – I recently changed the size of the image generated by the –drawcrossection option from 500x500 to 1000x1000 and must have forgotten
to change it back. If you use</span></p>
<p class="ecxMsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D;">display -size 1000x1000 -depth 8 debug_crossSec_118.gray</span></p>
<p class="ecxMsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D;"> </span></p>
<p class="ecxMsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D;">instead you should get the image you’re after.</span></p>
<p class="ecxMsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D;"> </span></p>
<p class="ecxMsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D;">Cheers,</span></p>
<p class="ecxMsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D;"> </span></p>
<p class="ecxMsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D;">Matt.</span></p>
<p class="ecxMsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1F497D;"> </span></p>
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<p class="ecxMsoNormal"><b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif";">From:</span></b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif";"> camino-users-bounces@www.nitrc.org [mailto:camino-users-bounces@www.nitrc.org]
<b>On Behalf Of </b>stefania oliviero<br>
<b>Sent:</b> Thursday, February 20, 2014 1:10 PM<br>
<b>To:</b> camino-users@www.nitrc.org<br>
<b>Subject:</b> [Camino-users] -drawcrosssection option</span></p>
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<p class="ecxMsoNormal"><span style="font-family:"Calibri","sans-serif";">Hi all<br>
I am a new user of the camino toolkit, sorry if my questions are too much basic.<br>
<br>
I'm following the instructions at the end of the ActiveAx tutorial:<br>
<a href="http://cmic.cs.ucl.ac.uk/camino/index.php?n=Tutorials.ActiveAx#toc1" target="_blank">http://cmic.cs.ucl.ac.uk/camino//index.php?n=Tutorials.ActiveAx#toc1</a><br>
<br>
When I execute the following commands</span></p>
<pre>DIFF=6.0E-10;<br>LATSIZE=1.4E-5</pre>
<pre>GAMA=5.9242</pre>
<pre>GAMB=1.065E-7<br><br>datasynth -walkers 5 -tmax 5 -geometry inflammation -numcylinders 100 -p 0.0 -initial uniform -voxels 1 \</pre>
<pre>-increments 1 -separateruns -latticesize ${LATSIZE} -schemefile ActiveAxG140_PM.scheme1 -gamma ${GAMA} ${GAMB} \</pre>
<pre>-diffusivity ${DIFF} -substrateinfo -drawcrosssection LamD1aSubstrate.gray > /tmp/test.Bfloat > LamD1a.info</pre>
<p class="ecxMsoNormal"><span style="font-family:"Calibri","sans-serif";">the outputs are these three files:</span></p>
<pre style="">test.Bfloat <br>LamD1a.info<br><b>debug_crossSec_118.gray</b> instead of <b>LamD1aSubstrate.gray</b><br><br>Then I execute <br><br> display -size 500x500 -depth 8 debug_crossSec_118.gray<br><br>and have the following image instead of that showed on the tutorial...<br><br>WHAT'S THE PROBLEM?<br>... I tried to solve my problem looking for more information about -drawcrosssection option, but I failed.<br><br>Thanks a lot<br>Stefania <br><br></pre>
<p class="ecxMsoNormal"><span style="font-family:"Calibri","sans-serif";"> </span></p>
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