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Hello,
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<div>Thanks so much for your prompt response. I’ll adjust it accordingly.</div>
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<div>Kind regards.<br>
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<div dir="ltr">Sent from my iPhone</div>
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<blockquote type="cite">On Dec 22, 2021, at 9:53 PM, Cook, Philip <cookpa@pennmedicine.upenn.edu> wrote:<br>
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<p class="MsoNormal">Hi,<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">There's two options for generating the streamlines, I can't recall which one was used to make the figure. The probabilistic tracking will vary run to run because of random sampling.<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Also, it looks like your heatmap has different row ordering and color key. You can try adding Rowv=TRUE, Colv=TRUE, dendrogram = "none", to make them look more similar, but I'm sorry I don't know the exact command that was used.<o:p></o:p></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt"><b><span style="font-size:12.0pt;color:black">From:
</span></b><span style="font-size:12.0pt;color:black">Camino-users <camino-users-bounces@www.nitrc.org> on behalf of Toluwani Amos <amosteee@hotmail.com><br>
<b>Date: </b>Wednesday, December 22, 2021 at 5:50 AM<br>
<b>To: </b>camino-users@www.nitrc.org <camino-users@www.nitrc.org><br>
<b>Subject: </b>[External] [Camino-users] Fwd: Replicating Sample Data (Minimum FA matrix)<o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt"><o:p> </o:p></p>
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<p class="MsoNormal">Sent from my iPhone<o:p></o:p></p>
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Begin forwarded message:<o:p></o:p></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt"><b>From:</b> Toluwani Amos <amosteee@hotmail.com><br>
<b>Date:</b> December 22, 2021 at 4:15:39 PM GMT+8<br>
<b>To:</b> camino-users@www.nitrc.org<br>
<b>Subject:</b> <b>Replicating Sample Data (Minimum FA matrix)</b><o:p></o:p></p>
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<p class="MsoNormal"> <o:p></o:p></p>
<p class="MsoNormal">Dear all,<o:p></o:p></p>
<p class="MsoNormal"> <o:p></o:p></p>
<p class="MsoNormal">I tried replicating the analysis steps using camino as stated in:
<a href="http://camino.cs.ucl.ac.uk/index.php?n=Tutorials.ConnectivityMatrices">Camino | Connectivity Matrices (ucl.ac.uk)</a><o:p></o:p></p>
<p class="MsoNormal"> <o:p></o:p></p>
<p class="MsoNormal">However, the final connectivity matrix looked different from the one I got. I used the same sample data and steps.<o:p></o:p></p>
<p class="MsoNormal"> <o:p></o:p></p>
<p class="MsoNormal">Please what do you think I might be missing.<o:p></o:p></p>
<p class="MsoNormal"> <o:p></o:p></p>
<p class="MsoNormal">Here are the attached images.<o:p></o:p></p>
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<div><F96B2E0B8C2C451191753335EB858C1F.png></div>
<o:p></o:p>
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<p class="MsoNormal">Thanks.<o:p></o:p></p>
<p class="MsoNormal">Sent from <a href="https://go.microsoft.com/fwlink/?LinkId=550986">
Mail</a> for Windows<o:p></o:p></p>
<p class="MsoNormal"> <o:p></o:p></p>
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