From NITRC Wiki

BRAINSROIAuto

BRAINSROIAuto is a batch-mode program that creates a mask image representing the 'foreground' area of an image volume.

BRAINSROIAuto is part of the BRAINS suite of tools that include:

1. BRAINSDemonWarp
2. BRAINSCut
3. BRAINSMush
4. BRAINSFit
5. BRAINSTracer
6. BRAINSROIAuto

These tools are all developed withing the NAMIC best practices guidelines, and the command line tools are compliant with the Slicer Execution Model.

• BRAINSROIAuto usage documentation
• Instructions for building BRAINSROIAuto
• A common usecase for BRAINFROIAuto
• Testing Dashboard forBRAINSROIAuto