ccseg:MainPage
From NITRC Wiki
CCseg is an open-source software that allows a semi-automatic segmentation of the corpus callosum and provides volume information.
You can call CCseg by using the Graphical User Interface or by Command Line.
E.g :
./CCseg --gui
or
./CCseg -I /biomed-resimg/Autism2/IBIS2/people/yben/5002-003-01_10_T1.hdr -M /biomed-resimg/Autism2/IBIS2/people/yben/5002-003-01_10_t2_fit_hard.hdr -A /tools/CCsegmenter_autism/Model/ -O /home/ -N test --sliceDir 0 --ReflectX --double --ComputeProbaModel
For more precision, look at the tutorial in the documents.
How to use CCSeg?
To compile several data, look at the example in Docs.
You can download a CCSegAtlas where there is the model.
Here is the description of the different files :
For Mac Users, if you want to use CCSeg :
Download the executable for Mac (Darwin).
Download Qt form this website : http://qt.nokia.com/downloads.
Click on LGPL and Qt SDK for Mac(927 MB).
Install the package.
CCSeg will work now.
