dtiprocess:Dtiaverage

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DTIAverage

DTIAverage

General Information

Module Type & Category

Type: CLI

Category: DTI.DTIProcess

Authors, Collaborators & Contact

Author: Casey Goodlett

Contributors: Hans Johnson, Sylvain Gouttard

Contact: Sylvain Gouttard, gouttard@sci.utah.edu

Module Description

Program title	DTIAverage
Program description	dtiaverage is a program that allows to compute the average of an arbitrary number of tensor fields (listed after the --inputs option) This program is used in our pipeline as the last step of the atlas building processing. When all the tensor fields have been deformed in the same space, to create the average tensor field (--tensor_output) we use dtiaverage. Several average method can be used (specified by the --method option): euclidian, log-euclidian and pga. The default being euclidian.
Program version	1.0.0
Program documentation-url	http://www.google.com/

Usage

Use Cases, Examples

This module is especially appropriate for these use cases:

• Use Case 1:
• Use Case 2:

Examples of the module in use:

• Example 1:
• Example 2:

Tutorials

• Tutorial 1
  • Data Set 1

Quick Tour of Features and Use

A list panels in the interface, their features, what they mean, and how to use them.

Verbose Verbose [----verbose] [-v]: produce verbose output Default value: 0 Averaged tensor field file name [----tensor_output] : Averaged tensor volume Inputs [----inputs] : List of all the tensor fields to be averaged

Image:ScreenshotBlankNotOptional.png User Interface

Development

Notes from the Developer(s)

Algorithms used, library classes depended upon, use cases, etc.

Dependencies

Other modules or packages that are required for this module's use.

Tests

On the Dashboard, these tests verify that the module is working on various platforms:

• MyModuleTest1 MyModuleTest1.cxx
• MyModuleTest2 MyModuleTest2.cxx

Known bugs

Links to known bugs in the Slicer3 bug tracker

• Bug 000: description

Usability issues

Follow this link to the Slicer3 bug tracker. Please select the usability issue category when browsing or contributing.

Source code & documentation

Links to the module's source code:

Source code:

• file.cxx
• file.h

Doxygen documentation:

• class1

More Information

Acknowledgment

References

Publications related to this module go here. Links to pdfs would be useful.