#!/usr/bin/ksh
. $WFU_PATH/global.site.ksh
DISPLAY=$batch_display:0.0
export DISPLAY
#----------------------------------#
#   Define pfiles and directories  #
#----------------------------------#
fileid=`echo $$`
label=`date '+%m_%d_%y'`
pfile=$1
datadir=`dirname $pfile`
fname=`basename $pfile`
#-------------------------------------------------
#matlab scripts can only have 1 dot for the .m
#-------------------------------------------------
fname1=`echo $fname | tr -s '.' '_'`
mkdir -p $datadir/log
chmod g+w $datadir/log
outputfile=`echo $datadir/log/$fname.output_recon_matlab`
mxfile=`echo $datadir/log/autorecon_matlab$fileid.m`
matCmds="wfu_startup([],2);run('$mxfile');"



echo "pfile ='"$pfile"';" > $mxfile
echo "%--------------------------------------------------%" >> $mxfile
echo "%         Use matlab to recon the pfile            %" >> $mxfile
echo "%--------------------------------------------------%" >> $mxfile
echo "cd '"$datadir"';" >> $mxfile
echo "wfu_recon(pfile);" >> $mxfile
echo "exit;" >> $mxfile

#----------------------------------#
#   Execute the autorecon script   #
#----------------------------------#
${batch_matlab} -r $matCmds

exit
