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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron348834      
  2ITK-SNAP87852      
  31000 Functional Connectomes Project74900      
  4DTI-TK63571      
  5WFU_PickAtlas23116      
  6TOADS-CRUISE Brain Segmentation Tools22506      
  7EEGLAB18956      
  8DSI Studio17679      
  9CONN : functional connectivity toolbox16799      
  10Multi-Modal MRI Reproducibility Resource16401      
  11JIST: Java Image Science Toolkit12205      
  12Functional Imaging BIRN11645      
  13The Neuro Bureau9440      
  14MINC - Medical Image NetCDF8863      
  15BrainNet Viewer7827      
  16Talairach Daemon7528      
  17PANDA: a pipeline tool for diffusion MRI7527      
  18MRtrix7234      
  19BrainMap Database7178      
  20GIFTI6754      
  21NeuroDebian6561      
  22BrainVisa Morphologist extensions6533      
  23Subject Order-Independent Group ICA6227      
  24Mango5843      
  25Automatic Registration Toolbox5835      
  263D Slicer5686      
  27BrainVISA5511      
  28IBSR5329      
  29fMRI-CPCA5079      
  30BrainMask Volume Processing Tool4853      
  31Diffusion Toolkit / TrackVis4814      
  32LONI Pipeline Environment4540      
  333DSlicerLupusLesionModule4470      
  34FSL4401      
  35The IIT Human Brain Atlas (v.3)4377      
  36BioImage Suite4358      
  37BrainVoyager QX4080      
  38XNAT Extras3939      
  39Generalized PPI Toolbox3894      
  40Artifact Detection Tools (ART)3842      
  41SRI24 Atlas: Normal Adult Brain Anatomy3742      
  42Hammer And WML Modules for 3D Slicer3587      
  43BrainVoyager Brain Tutor3301      
  44Neuroimaging Made Easy Blog3182      
  45NYU CSC TestRetest3181      
  46Human Imaging Database (HID)3110      
  47Group ICA Toolbox (GIFT and EEGIFT)3056      
  48Solar Eclipse Imaging Genetics tools3041      
  49Computational Morphometry Toolkit (CMTK)2939      
  50Data Format Tools2825      
  51MITK Diffusion2665      
  52HAMMER: Deformable Registration2660      
  53Center for Functional Neuroimaging Tech2646      
  54Maps4Mipav (Exploratory JIST) 2633      
  55NIfTI2535      
  56FBIRN Image Processing Scripts (FIPS)2479      
  57ABC (Atlas Based Classification)2386      
  58ABSORB for groupwise registration2368      
  59GLIRT2297      
  60MATLAB Tutorial on Diffusion Tensor MRI2286      
  61Spatially Constrained Parcellation2261      
  62UNC 0-1-2 Infant Atlases2160      
  63Optseq - fMRI Event Scheduler2125      
  64BrainSuite2099      
  65LONI Debabeler2092      
  66SPM2088      
  67Task Independent Fluctuations Discussion2056      
  68MRI Defacer2031      
  69BXH/XCEDE Tools1980      
  70MIPAV1948      
  71JIP fMRI Analysis Toolkit1942      
  72SPHARM-PDM Toolbox1876      
  73CANDI Neuroimaging Access Point1806      
  74TumorSim1801      
  75REX1786      
  76MRI Studio1729      
  77Waxholm Space Atlas1718      
  78XNAT1662      
  79NeuroImaging Analysis Kit (NIAK)1648      
  80Pipeline system for Octave and Matlab1640      
  81ARCTIC1639      
  82Numerical Fibre Generator (NFG)1621      
  83FMRIpower1614      
  84Licensing1482      
  85DWI/DTI Quality Control Tool: DTIPrep1412      
  86BrainSolution1308      
  87NIH Pediatric MRI Data Repository1281      
  88Network-Based Statistic (NBS)1271      
  89WFU_Pipeline1250      
  90PESTICA & SLOMOCO: physio and motion correction tools1249      
  913D Interactive Chemical Shift Imaging1231      
  92Brainscape1225      
  93Slicer3 Example Modules1213      
  94Gradient Non-linearity Unwarping Tool1198      
  95Vaa3D and Vaa3D-Neuron1187      
  96BRAINSFit1135      
  97BrainParser1124      
  98DicomBrowser1121      
  99xjView, a viewing tool for SPM1112      
  100GRETNA1096