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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron348025      
  2ITK-SNAP87412      
  31000 Functional Connectomes Project74730      
  4DTI-TK63518      
  5WFU_PickAtlas23046      
  6TOADS-CRUISE Brain Segmentation Tools22464      
  7EEGLAB18766      
  8DSI Studio17605      
  9CONN : functional connectivity toolbox16674      
  10Multi-Modal MRI Reproducibility Resource16332      
  11JIST: Java Image Science Toolkit12177      
  12Functional Imaging BIRN11619      
  13The Neuro Bureau9424      
  14MINC - Medical Image NetCDF8828      
  15BrainNet Viewer7797      
  16Talairach Daemon7515      
  17PANDA: a pipeline tool for diffusion MRI7461      
  18MRtrix7218      
  19BrainMap Database7164      
  20GIFTI6744      
  21NeuroDebian6527      
  22BrainVisa Morphologist extensions6498      
  23Subject Order-Independent Group ICA6223      
  24Automatic Registration Toolbox5820      
  25Mango5799      
  263D Slicer5655      
  27BrainVISA5479      
  28IBSR5191      
  29fMRI-CPCA5070      
  30BrainMask Volume Processing Tool4849      
  31Diffusion Toolkit / TrackVis4800      
  32LONI Pipeline Environment4531      
  333DSlicerLupusLesionModule4460      
  34FSL4390      
  35The IIT Human Brain Atlas (v.3)4350      
  36BioImage Suite4348      
  37BrainVoyager QX4073      
  38XNAT Extras3925      
  39Generalized PPI Toolbox3846      
  40Artifact Detection Tools (ART)3821      
  41SRI24 Atlas: Normal Adult Brain Anatomy3734      
  42Hammer And WML Modules for 3D Slicer3574      
  43BrainVoyager Brain Tutor3289      
  44NYU CSC TestRetest3169      
  45Neuroimaging Made Easy Blog3163      
  46Human Imaging Database (HID)3100      
  47Group ICA Toolbox (GIFT and EEGIFT)3038      
  48Solar Eclipse Imaging Genetics tools3007      
  49Computational Morphometry Toolkit (CMTK)2929      
  50Data Format Tools2803      
  51HAMMER: Deformable Registration2654      
  52Center for Functional Neuroimaging Tech2637      
  53Maps4Mipav (Exploratory JIST) 2631      
  54MITK Diffusion2620      
  55NIfTI2525      
  56FBIRN Image Processing Scripts (FIPS)2463      
  57ABC (Atlas Based Classification)2383      
  58ABSORB for groupwise registration2351      
  59GLIRT2287      
  60MATLAB Tutorial on Diffusion Tensor MRI2279      
  61Spatially Constrained Parcellation2248      
  62UNC 0-1-2 Infant Atlases2148      
  63Optseq - fMRI Event Scheduler2126      
  64BrainSuite2091      
  65LONI Debabeler2086      
  66SPM2086      
  67Task Independent Fluctuations Discussion2051      
  68MRI Defacer2021      
  69BXH/XCEDE Tools1968      
  70MIPAV1947      
  71JIP fMRI Analysis Toolkit1934      
  72SPHARM-PDM Toolbox1871      
  73CANDI Neuroimaging Access Point1800      
  74TumorSim1788      
  75REX1783      
  76MRI Studio1726      
  77Waxholm Space Atlas1716      
  78XNAT1652      
  79ARCTIC1638      
  80Pipeline system for Octave and Matlab1633      
  81Numerical Fibre Generator (NFG)1618      
  82NeuroImaging Analysis Kit (NIAK)1612      
  83FMRIpower1602      
  84Licensing1472      
  85DWI/DTI Quality Control Tool: DTIPrep1405      
  86BrainSolution1300      
  87NIH Pediatric MRI Data Repository1272      
  88Network-Based Statistic (NBS)1256      
  89WFU_Pipeline1247      
  90PESTICA & SLOMOCO: physio and motion correction tools1242      
  913D Interactive Chemical Shift Imaging1229      
  92Brainscape1220      
  93Slicer3 Example Modules1206      
  94Gradient Non-linearity Unwarping Tool1195      
  95Vaa3D and Vaa3D-Neuron1187      
  96BRAINSFit1135      
  97BrainParser1122      
  98DicomBrowser1115      
  99xjView, a viewing tool for SPM1112      
  100GRETNA1084