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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  31000 Functional Connectomes Project91466      
  6CONN : functional connectivity toolbox34957      
  9TOADS-CRUISE Brain Segmentation Tools26708      
  10DSI Studio25281      
  11Multi-Modal MRI Reproducibility Resource22178      
  12IIT Human Brain Atlas (v.4.1)16672      
  14JIST: Java Image Science Toolkit14646      
  15Functional Imaging BIRN14563      
  16BrainNet Viewer13221      
  17The Neuro Bureau12537      
  18PANDA: a pipeline tool for diffusion MRI12509      
  20MINC - Medical Image NetCDF10240      
  21Generalized PPI Toolbox9969      
  22BrainVisa Morphologist extensions9320      
  27Talairach Daemon8442      
  28BrainMap Database8362      
  293D Slicer8187      
  31Solar Eclipse Imaging Genetics tools7666      
  32Automatic Registration Toolbox7441      
  34Subject Order-Independent Group ICA7096      
  35MITK Diffusion6943      
  36BioImage Suite6674      
  38Diffusion Toolkit / TrackVis6348      
  39BrainMask Volume Processing Tool5930      
  40Neuroimaging Made Easy Blog5825      
  41Artifact Detection Tools (ART)5628      
  42XNAT Extras5520      
  45NYU CSC TestRetest4970      
  46Hammer And WML Modules for 3D Slicer4934      
  48Data Format Tools4825      
  49Group ICA Toolbox (GIFT and EEGIFT)4815      
  50LONI Pipeline Environment4644      
  51SRI24 Atlas: Normal Adult Brain Anatomy4458      
  52Spatially Constrained Parcellation4426      
  53Computational Morphometry Toolkit (CMTK)4405      
  54BrainVoyager Brain Tutor4036      
  55fNIRS Data Analysis Environment4031      
  56Human Imaging Database (HID)3934      
  57NeuroImaging Analysis Kit (NIAK)3675      
  58UNC 0-1-2 Infant Atlases3598      
  59Network-Based Statistic (NBS)3598      
  60Center for Functional Neuroimaging Tech3469      
  61ABSORB for groupwise registration3218      
  62FBIRN Image Processing Scripts (FIPS)3193      
  63MATLAB Tutorial on Diffusion Tensor MRI3167      
  64HAMMER: Deformable Registration3116      
  67Source Information Flow Toolbox3005      
  68Maps4Mipav (Exploratory JIST) 2988      
  71ABC (Atlas Based Classification)2888      
  72SPHARM-PDM Toolbox2794      
  73MRI Defacer2769      
  74BXH/XCEDE Tools2767      
  75Optseq - fMRI Event Scheduler2631      
  78LONI Debabeler2530      
  79Pipeline system for Octave and Matlab2529      
  80Task Independent Fluctuations Discussion2526      
  81CANDI Neuroimaging Access Point2484      
  84GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity2408      
  85DWI/DTI Quality Control Tool: DTIPrep2350      
  86JIP fMRI Analysis Toolkit2330      
  88Waxholm Space Atlas2256      
  89Vaa3D and Vaa3D-Neuron2236      
  90MRI Studio2130      
  91CBS High-Res Brain Processing Tools2127      
  932008 MICCAI MS Lesion Segmentation Challenge2100      
  95Numerical Fibre Generator (NFG)2037      
  96PESTICA & SLOMOCO: physio and motion correction tools2030      
  100MARS (Multi-Atlas Robust Segmentation)1858