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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron460366      
  2ITK-SNAP146112      
  31000 Functional Connectomes Project96846      
  4DTI-TK69478      
  5CONN : functional connectivity toolbox38940      
  6EEGLAB38134      
  7FreeSurfer36119      
  8WFU_PickAtlas28794      
  9TOADS-CRUISE Brain Segmentation Tools27289      
  10DSI Studio26306      
  11Multi-Modal MRI Reproducibility Resource23443      
  12Nilearn22720      
  13IIT Human Brain Atlas (v.4.1)18661      
  14JIST: Java Image Science Toolkit15068      
  15Functional Imaging BIRN15013      
  16BrainNet Viewer14365      
  17PANDA: a pipeline tool for diffusion MRI13522      
  18The Neuro Bureau12999      
  19IBSR12915      
  20Generalized PPI Toolbox11052      
  21MINC - Medical Image NetCDF10515      
  22MRIcroGL10460      
  23BrainVisa Morphologist extensions9791      
  24NeuroDebian9612      
  25GIFTI9529      
  26Mango8881      
  27MRtrix8746      
  28Solar Eclipse Imaging Genetics tools8736      
  293D Slicer8724      
  30Talairach Daemon8575      
  31BrainMap Database8551      
  32MITK Diffusion7778      
  33BrainVISA7622      
  34Automatic Registration Toolbox7593      
  35BioImage Suite7494      
  36Subject Order-Independent Group ICA7217      
  37fMRI-CPCA6936      
  38Diffusion Toolkit / TrackVis6666      
  39Neuroimaging Made Easy Blog6453      
  40BrainMask Volume Processing Tool6141      
  41Artifact Detection Tools (ART)5901      
  42XNAT Extras5839      
  433DSlicerLupusLesionModule5496      
  44FSL5443      
  45NYU CSC TestRetest5286      
  46BrainVoyager5181      
  47Data Format Tools5171      
  48Hammer And WML Modules for 3D Slicer5169      
  49Group ICA Toolbox (GIFT and EEGIFT)5094      
  50fNIRS Data Analysis Environment4986      
  51Spatially Constrained Parcellation4808      
  52LONI Pipeline Environment4767      
  53Computational Morphometry Toolkit (CMTK)4612      
  54SRI24 Atlas: Normal Adult Brain Anatomy4569      
  55BrainVoyager Brain Tutor4213      
  56NeuroImaging Analysis Kit (NIAK)4200      
  57Network-Based Statistic (NBS)4087      
  58Human Imaging Database (HID)4081      
  59UNC 0-1-2 Infant Atlases3986      
  60Center for Functional Neuroimaging Tech3698      
  61Source Information Flow Toolbox3406      
  62SPM3362      
  63FBIRN Image Processing Scripts (FIPS)3354      
  64ABSORB for groupwise registration3351      
  65MATLAB Tutorial on Diffusion Tensor MRI3321      
  66GRETNA3265      
  67NIfTI3216      
  68HAMMER: Deformable Registration3204      
  69TumorSim3119      
  70Maps4Mipav (Exploratory JIST) 3017      
  71SPHARM-PDM Toolbox2985      
  72ABC (Atlas Based Classification)2979      
  73MRI Defacer2960      
  74BXH/XCEDE Tools2886      
  75BrainSuite2749      
  76Optseq - fMRI Event Scheduler2739      
  77GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity2718      
  78GLIRT2689      
  79Vaa3D and Vaa3D-Neuron2671      
  80Pipeline system for Octave and Matlab2637      
  81REX2632      
  82CANDI Neuroimaging Access Point2628      
  83FMRIpower2625      
  84Task Independent Fluctuations Discussion2614      
  85LONI Debabeler2605      
  86DWI/DTI Quality Control Tool: DTIPrep2559      
  872008 MICCAI MS Lesion Segmentation Challenge2422      
  88CBS High-Res Brain Processing Tools2403      
  89JIP fMRI Analysis Toolkit2368      
  90Waxholm Space Atlas2363      
  91MIPAV2334      
  92MRI Studio2221      
  93XNAT2208      
  94Licensing2194      
  95PESTICA & SLOMOCO: physio and motion correction tools2160      
  96iBEAT2158      
  97Numerical Fibre Generator (NFG)2143      
  98DicomBrowser2132      
  99age-ility2119      
  100MARS (Multi-Atlas Robust Segmentation)2102