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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron352479      
  2ITK-SNAP89578      
  31000 Functional Connectomes Project75756      
  4DTI-TK63774      
  5WFU_PickAtlas23328      
  6TOADS-CRUISE Brain Segmentation Tools22719      
  7EEGLAB19704      
  8DSI Studio18034      
  9CONN : functional connectivity toolbox17351      
  10Multi-Modal MRI Reproducibility Resource16595      
  11JIST: Java Image Science Toolkit12313      
  12Functional Imaging BIRN11791      
  13The Neuro Bureau9462      
  14MINC - Medical Image NetCDF8966      
  15BrainNet Viewer8029      
  16PANDA: a pipeline tool for diffusion MRI7723      
  17Talairach Daemon7577      
  18MRtrix7316      
  19BrainMap Database7193      
  20GIFTI6877      
  21NeuroDebian6699      
  22BrainVisa Morphologist extensions6672      
  23Subject Order-Independent Group ICA6274      
  24Mango5992      
  25Automatic Registration Toolbox5920      
  263D Slicer5781      
  27BrainVISA5585      
  28IBSR5542      
  29fMRI-CPCA5164      
  30BrainMask Volume Processing Tool4889      
  31Diffusion Toolkit / TrackVis4878      
  32The IIT Human Brain Atlas (v.3.1)4742      
  33LONI Pipeline Environment4564      
  343DSlicerLupusLesionModule4517      
  35FSL4451      
  36BioImage Suite4411      
  37Generalized PPI Toolbox4142      
  38BrainVoyager QX4113      
  39XNAT Extras4038      
  40Artifact Detection Tools (ART)3925      
  41SRI24 Atlas: Normal Adult Brain Anatomy3804      
  42Hammer And WML Modules for 3D Slicer3627      
  43BrainVoyager Brain Tutor3330      
  44Neuroimaging Made Easy Blog3297      
  45NYU CSC TestRetest3239      
  46Human Imaging Database (HID)3154      
  47Group ICA Toolbox (GIFT and EEGIFT)3143      
  48Solar Eclipse Imaging Genetics tools3136      
  49Computational Morphometry Toolkit (CMTK)2989      
  50Data Format Tools2914      
  51MITK Diffusion2779      
  52Center for Functional Neuroimaging Tech2679      
  53HAMMER: Deformable Registration2669      
  54Maps4Mipav (Exploratory JIST) 2640      
  55NIfTI2550      
  56FBIRN Image Processing Scripts (FIPS)2506      
  57ABC (Atlas Based Classification)2429      
  58ABSORB for groupwise registration2416      
  59Spatially Constrained Parcellation2334      
  60MATLAB Tutorial on Diffusion Tensor MRI2320      
  61GLIRT2303      
  62UNC 0-1-2 Infant Atlases2204      
  63Optseq - fMRI Event Scheduler2148      
  64BrainSuite2134      
  65SPM2115      
  66LONI Debabeler2109      
  67Task Independent Fluctuations Discussion2078      
  68MRI Defacer2063      
  69BXH/XCEDE Tools2015      
  70JIP fMRI Analysis Toolkit1963      
  71MIPAV1959      
  72SPHARM-PDM Toolbox1907      
  73TumorSim1825      
  74CANDI Neuroimaging Access Point1824      
  75REX1813      
  76MRI Studio1751      
  77Waxholm Space Atlas1747      
  78NeuroImaging Analysis Kit (NIAK)1744      
  79XNAT1678      
  80Pipeline system for Octave and Matlab1669      
  81FMRIpower1649      
  82ARCTIC1646      
  83Numerical Fibre Generator (NFG)1638      
  84Licensing1505      
  85FreeSurfer1459      
  86DWI/DTI Quality Control Tool: DTIPrep1450      
  87Network-Based Statistic (NBS)1350      
  88BrainSolution1331      
  89NIH Pediatric MRI Data Repository1303      
  90PESTICA & SLOMOCO: physio and motion correction tools1297      
  91WFU_Pipeline1262      
  923D Interactive Chemical Shift Imaging1249      
  93Brainscape1237      
  94Slicer3 Example Modules1233      
  95Gradient Non-linearity Unwarping Tool1218      
  96Vaa3D and Vaa3D-Neuron1187      
  97DicomBrowser1154      
  98BRAINSFit1135      
  99GRETNA1132      
  100BrainParser1128