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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  31000 Functional Connectomes Project84905      
  7CONN : functional connectivity toolbox28011      
  9TOADS-CRUISE Brain Segmentation Tools25433      
  10DSI Studio23127      
  11Multi-Modal MRI Reproducibility Resource20034      
  12JIST: Java Image Science Toolkit13851      
  13Functional Imaging BIRN13619      
  14IIT Human Brain Atlas (v.4.0)11280      
  15The Neuro Bureau11261      
  16BrainNet Viewer11136      
  17PANDA: a pipeline tool for diffusion MRI10636      
  18MINC - Medical Image NetCDF9692      
  20BrainVisa Morphologist extensions8499      
  24Talairach Daemon8190      
  25BrainMap Database8004      
  26Generalized PPI Toolbox7980      
  283D Slicer7262      
  29Automatic Registration Toolbox7143      
  30Subject Order-Independent Group ICA6846      
  33Diffusion Toolkit / TrackVis5793      
  34Solar Eclipse Imaging Genetics tools5751      
  35BrainMask Volume Processing Tool5596      
  36MITK Diffusion5410      
  37BioImage Suite5069      
  38Artifact Detection Tools (ART)5035      
  40XNAT Extras4939      
  42Neuroimaging Made Easy Blog4902      
  44LONI Pipeline Environment4589      
  45BrainVoyager QX4537      
  46Hammer And WML Modules for 3D Slicer4405      
  47Group ICA Toolbox (GIFT and EEGIFT)4365      
  48SRI24 Atlas: Normal Adult Brain Anatomy4265      
  49NYU CSC TestRetest4188      
  50Data Format Tools4171      
  51Computational Morphometry Toolkit (CMTK)3854      
  52BrainVoyager Brain Tutor3727      
  53Human Imaging Database (HID)3643      
  54Spatially Constrained Parcellation3607      
  55Center for Functional Neuroimaging Tech3141      
  56NeuroImaging Analysis Kit (NIAK)3096      
  57HAMMER: Deformable Registration3008      
  58ABSORB for groupwise registration3005      
  59UNC 0-1-2 Infant Atlases2975      
  60FBIRN Image Processing Scripts (FIPS)2973      
  61Network-Based Statistic (NBS)2967      
  62Maps4Mipav (Exploratory JIST) 2909      
  64MATLAB Tutorial on Diffusion Tensor MRI2866      
  65fNIRS Data Analysis Environment2768      
  66ABC (Atlas Based Classification)2735      
  68MRI Defacer2522      
  71SPHARM-PDM Toolbox2496      
  72BXH/XCEDE Tools2452      
  73Optseq - fMRI Event Scheduler2447      
  75Task Independent Fluctuations Discussion2394      
  76LONI Debabeler2388      
  78Pipeline system for Octave and Matlab2303      
  79Source Information Flow Toolbox2280      
  80CANDI Neuroimaging Access Point2260      
  82JIP fMRI Analysis Toolkit2216      
  86DWI/DTI Quality Control Tool: DTIPrep2089      
  87Waxholm Space Atlas2049      
  88MRI Studio1990      
  91Numerical Fibre Generator (NFG)1812      
  93PESTICA & SLOMOCO: physio and motion correction tools1802      
  95GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity1665      
  96Vaa3D and Vaa3D-Neuron1595      
  97CBS High-Res Brain Processing Tools1593      
  1002008 MICCAI MS Lesion Segmentation Challenge1542