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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron382857      
  2ITK-SNAP105039      
  31000 Functional Connectomes Project79859      
  4DTI-TK65470      
  5EEGLAB25465      
  6WFU_PickAtlas24919      
  7TOADS-CRUISE Brain Segmentation Tools24125      
  8CONN : functional connectivity toolbox22468      
  9FreeSurfer21846      
  10DSI Studio20626      
  11Multi-Modal MRI Reproducibility Resource17847      
  12JIST: Java Image Science Toolkit13144      
  13Functional Imaging BIRN12676      
  14The Neuro Bureau10542      
  15BrainNet Viewer9467      
  16MINC - Medical Image NetCDF9176      
  17PANDA: a pipeline tool for diffusion MRI8887      
  18Talairach Daemon7895      
  19MRtrix7834      
  20BrainVisa Morphologist extensions7623      
  21The IIT Human Brain Atlas (v.3.2)7601      
  22GIFTI7592      
  23IBSR7579      
  24BrainMap Database7567      
  25NeuroDebian7304      
  26Mango7129      
  27Subject Order-Independent Group ICA6575      
  28Automatic Registration Toolbox6504      
  293D Slicer6398      
  30Generalized PPI Toolbox6151      
  31BrainVISA6041      
  32fMRI-CPCA5639      
  33Diffusion Toolkit / TrackVis5301      
  34BrainMask Volume Processing Tool5221      
  353DSlicerLupusLesionModule4708      
  36BioImage Suite4637      
  37FSL4580      
  38Solar Eclipse Imaging Genetics tools4462      
  39Artifact Detection Tools (ART)4452      
  40LONI Pipeline Environment4378      
  41XNAT Extras4351      
  42BrainVoyager QX4189      
  43MITK Diffusion4125      
  44Neuroimaging Made Easy Blog4101      
  45Hammer And WML Modules for 3D Slicer3995      
  46SRI24 Atlas: Normal Adult Brain Anatomy3987      
  47Group ICA Toolbox (GIFT and EEGIFT)3767      
  48NYU CSC TestRetest3715      
  49Data Format Tools3662      
  50BrainVoyager Brain Tutor3531      
  51Computational Morphometry Toolkit (CMTK)3421      
  52Human Imaging Database (HID)3311      
  53Spatially Constrained Parcellation2908      
  54Center for Functional Neuroimaging Tech2870      
  55HAMMER: Deformable Registration2803      
  56ABSORB for groupwise registration2802      
  57Maps4Mipav (Exploratory JIST) 2798      
  58FBIRN Image Processing Scripts (FIPS)2741      
  59NIfTI2647      
  60ABC (Atlas Based Classification)2580      
  61MATLAB Tutorial on Diffusion Tensor MRI2570      
  62UNC 0-1-2 Infant Atlases2526      
  63GLIRT2393      
  64SPM2342      
  65Network-Based Statistic (NBS)2304      
  66NeuroImaging Analysis Kit (NIAK)2294      
  67MRI Defacer2290      
  68Optseq - fMRI Event Scheduler2241      
  69BrainSuite2241      
  70LONI Debabeler2232      
  71BXH/XCEDE Tools2211      
  72Task Independent Fluctuations Discussion2209      
  73SPHARM-PDM Toolbox2196      
  74TumorSim2145      
  75MRIcroGL2116      
  76JIP fMRI Analysis Toolkit2079      
  77MIPAV2053      
  78REX1995      
  79CANDI Neuroimaging Access Point1961      
  80Pipeline system for Octave and Matlab1927      
  81fNIRS Data Analysis Environment1914      
  82FMRIpower1897      
  83Waxholm Space Atlas1876      
  84MRI Studio1858      
  85XNAT1770      
  86DWI/DTI Quality Control Tool: DTIPrep1765      
  87Numerical Fibre Generator (NFG)1723      
  88ARCTIC1711      
  89Source Information Flow Toolbox1651      
  90Licensing1556      
  91GRETNA1546      
  92PESTICA & SLOMOCO: physio and motion correction tools1540      
  93DicomBrowser1447      
  94WFU_Pipeline1434      
  95NIH Pediatric MRI Data Repository1418      
  96BrainSolution1414      
  97Gradient Non-linearity Unwarping Tool1347      
  983D Interactive Chemical Shift Imaging1344      
  99Slicer3 Example Modules1331      
  100Brainscape1331