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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  31000 Functional Connectomes Project98689      
  5CONN : functional connectivity toolbox41176      
  9TOADS-CRUISE Brain Segmentation Tools27445      
  10DSI Studio26796      
  12Multi-Modal MRI Reproducibility Resource23949      
  13IIT Human Brain Atlas (v.4.1)19314      
  14Functional Imaging BIRN15379      
  15JIST: Java Image Science Toolkit15199      
  16BrainNet Viewer14944      
  17PANDA: a pipeline tool for diffusion MRI13891      
  19The Neuro Bureau13188      
  21Generalized PPI Toolbox11554      
  22MINC - Medical Image NetCDF10684      
  23BrainVisa Morphologist extensions9963      
  26Solar Eclipse Imaging Genetics tools9239      
  283D Slicer8951      
  30Talairach Daemon8632      
  31BrainMap Database8609      
  32MITK Diffusion8162      
  33BioImage Suite7800      
  35Automatic Registration Toolbox7667      
  36Subject Order-Independent Group ICA7282      
  38Diffusion Toolkit / TrackVis6836      
  39Neuroimaging Made Easy Blog6735      
  40BrainMask Volume Processing Tool6227      
  41Artifact Detection Tools (ART)6035      
  42XNAT Extras5988      
  45fNIRS Data Analysis Environment5486      
  46NYU CSC TestRetest5459      
  47Data Format Tools5316      
  48Hammer And WML Modules for 3D Slicer5233      
  50Group ICA Toolbox (GIFT and EEGIFT)5217      
  51Spatially Constrained Parcellation5017      
  52LONI Pipeline Environment4817      
  53Computational Morphometry Toolkit (CMTK)4749      
  54SRI24 Atlas: Normal Adult Brain Anatomy4625      
  55NeuroImaging Analysis Kit (NIAK)4396      
  56Network-Based Statistic (NBS)4283      
  57BrainVoyager Brain Tutor4270      
  58UNC 0-1-2 Infant Atlases4169      
  59Human Imaging Database (HID)4119      
  60Center for Functional Neuroimaging Tech3816      
  61Source Information Flow Toolbox3582      
  64ABSORB for groupwise registration3427      
  65FBIRN Image Processing Scripts (FIPS)3405      
  66MATLAB Tutorial on Diffusion Tensor MRI3377      
  68HAMMER: Deformable Registration3245      
  70SPHARM-PDM Toolbox3087      
  71Maps4Mipav (Exploratory JIST) 3032      
  72MRI Defacer3031      
  73ABC (Atlas Based Classification)3019      
  74GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity2983      
  75BXH/XCEDE Tools2943      
  76Vaa3D and Vaa3D-Neuron2818      
  78Optseq - fMRI Event Scheduler2782      
  82Pipeline system for Octave and Matlab2686      
  83CANDI Neuroimaging Access Point2681      
  842008 MICCAI MS Lesion Segmentation Challenge2676      
  85Task Independent Fluctuations Discussion2657      
  86DWI/DTI Quality Control Tool: DTIPrep2651      
  87LONI Debabeler2648      
  88CBS High-Res Brain Processing Tools2506      
  90JIP fMRI Analysis Toolkit2416      
  91Waxholm Space Atlas2409      
  933T DWI test-retest reliability dataset2310      
  96MRI Studio2258      
  98MARS (Multi-Atlas Robust Segmentation)2231      
  100PESTICA & SLOMOCO: physio and motion correction tools2213