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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron388640      
  2ITK-SNAP107340      
  31000 Functional Connectomes Project80462      
  4DTI-TK65718      
  5EEGLAB26484      
  6WFU_PickAtlas25140      
  7TOADS-CRUISE Brain Segmentation Tools24416      
  8FreeSurfer24201      
  9CONN : functional connectivity toolbox23177      
  10DSI Studio21042      
  11Multi-Modal MRI Reproducibility Resource18306      
  12JIST: Java Image Science Toolkit13239      
  13Functional Imaging BIRN12827      
  14The Neuro Bureau10572      
  15BrainNet Viewer9784      
  16PANDA: a pipeline tool for diffusion MRI9258      
  17MINC - Medical Image NetCDF9244      
  18The IIT Human Brain Atlas (v.3.2)8162      
  19Talairach Daemon7960      
  20MRtrix7908      
  21IBSR7867      
  22BrainVisa Morphologist extensions7780      
  23GIFTI7678      
  24BrainMap Database7648      
  25NeuroDebian7443      
  26Mango7241      
  27Subject Order-Independent Group ICA6627      
  28Automatic Registration Toolbox6591      
  293D Slicer6557      
  30Generalized PPI Toolbox6447      
  31BrainVISA6178      
  32fMRI-CPCA5745      
  33Diffusion Toolkit / TrackVis5419      
  34BrainMask Volume Processing Tool5303      
  353DSlicerLupusLesionModule4755      
  36Solar Eclipse Imaging Genetics tools4738      
  37BioImage Suite4700      
  38FSL4628      
  39Artifact Detection Tools (ART)4513      
  40XNAT Extras4491      
  41LONI Pipeline Environment4402      
  42MITK Diffusion4359      
  43BrainVoyager QX4242      
  44Neuroimaging Made Easy Blog4228      
  45Hammer And WML Modules for 3D Slicer4066      
  46SRI24 Atlas: Normal Adult Brain Anatomy4008      
  47Group ICA Toolbox (GIFT and EEGIFT)3852      
  48Data Format Tools3779      
  49NYU CSC TestRetest3774      
  50BrainVoyager Brain Tutor3568      
  51Computational Morphometry Toolkit (CMTK)3488      
  52Human Imaging Database (HID)3366      
  53Spatially Constrained Parcellation3015      
  54Center for Functional Neuroimaging Tech2927      
  55ABSORB for groupwise registration2867      
  56HAMMER: Deformable Registration2852      
  57Maps4Mipav (Exploratory JIST) 2821      
  58FBIRN Image Processing Scripts (FIPS)2791      
  59NIfTI2690      
  60MATLAB Tutorial on Diffusion Tensor MRI2621      
  61UNC 0-1-2 Infant Atlases2606      
  62ABC (Atlas Based Classification)2599      
  63MRIcroGL2475      
  64Network-Based Statistic (NBS)2443      
  65GLIRT2415      
  66NeuroImaging Analysis Kit (NIAK)2415      
  67SPM2404      
  68MRI Defacer2335      
  69BrainSuite2280      
  70Optseq - fMRI Event Scheduler2270      
  71LONI Debabeler2264      
  72SPHARM-PDM Toolbox2259      
  73Task Independent Fluctuations Discussion2249      
  74BXH/XCEDE Tools2246      
  75TumorSim2199      
  76JIP fMRI Analysis Toolkit2097      
  77MIPAV2071      
  78fNIRS Data Analysis Environment2061      
  79REX2038      
  80CANDI Neuroimaging Access Point2005      
  81Pipeline system for Octave and Matlab1983      
  82FMRIpower1944      
  83Waxholm Space Atlas1915      
  84MRI Studio1877      
  85DWI/DTI Quality Control Tool: DTIPrep1802      
  86XNAT1801      
  87Source Information Flow Toolbox1741      
  88Numerical Fibre Generator (NFG)1737      
  89ARCTIC1725      
  90GRETNA1679      
  91Licensing1616      
  92PESTICA & SLOMOCO: physio and motion correction tools1596      
  93DicomBrowser1480      
  94WFU_Pipeline1445      
  95NIH Pediatric MRI Data Repository1438      
  96BrainSolution1438      
  97Gradient Non-linearity Unwarping Tool1378      
  98Brainscape1357      
  993D Interactive Chemical Shift Imaging1355      
  100Slicer3 Example Modules1346