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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  31000 Functional Connectomes Project86345      
  7CONN : functional connectivity toolbox29594      
  9TOADS-CRUISE Brain Segmentation Tools25774      
  10DSI Studio23673      
  11Multi-Modal MRI Reproducibility Resource20640      
  12JIST: Java Image Science Toolkit14044      
  13Functional Imaging BIRN13842      
  14IIT Human Brain Atlas (v.4.1)12779      
  15BrainNet Viewer11702      
  16The Neuro Bureau11492      
  17PANDA: a pipeline tool for diffusion MRI11150      
  18MINC - Medical Image NetCDF9858      
  20BrainVisa Morphologist extensions8759      
  23Generalized PPI Toolbox8453      
  25Talairach Daemon8246      
  26BrainMap Database8097      
  283D Slicer7462      
  29Automatic Registration Toolbox7278      
  30Subject Order-Independent Group ICA6897      
  33Solar Eclipse Imaging Genetics tools6170      
  34Diffusion Toolkit / TrackVis5945      
  35MITK Diffusion5729      
  36BrainMask Volume Processing Tool5677      
  37BioImage Suite5484      
  39Artifact Detection Tools (ART)5219      
  40Neuroimaging Made Easy Blog5108      
  41XNAT Extras5088      
  44LONI Pipeline Environment4637      
  45BrainVoyager QX4615      
  46Hammer And WML Modules for 3D Slicer4557      
  47Group ICA Toolbox (GIFT and EEGIFT)4475      
  48NYU CSC TestRetest4331      
  49SRI24 Atlas: Normal Adult Brain Anatomy4319      
  50Data Format Tools4314      
  51Computational Morphometry Toolkit (CMTK)3970      
  52Spatially Constrained Parcellation3817      
  53BrainVoyager Brain Tutor3788      
  55Human Imaging Database (HID)3725      
  56NeuroImaging Analysis Kit (NIAK)3224      
  57Center for Functional Neuroimaging Tech3209      
  58Network-Based Statistic (NBS)3133      
  59UNC 0-1-2 Infant Atlases3114      
  60ABSORB for groupwise registration3069      
  61fNIRS Data Analysis Environment3046      
  62FBIRN Image Processing Scripts (FIPS)3036      
  63HAMMER: Deformable Registration3033      
  64MATLAB Tutorial on Diffusion Tensor MRI2936      
  66Maps4Mipav (Exploratory JIST) 2931      
  67ABC (Atlas Based Classification)2785      
  70MRI Defacer2580      
  72SPHARM-PDM Toolbox2550      
  73BXH/XCEDE Tools2543      
  74Optseq - fMRI Event Scheduler2500      
  76LONI Debabeler2439      
  77Source Information Flow Toolbox2439      
  78Task Independent Fluctuations Discussion2425      
  79Pipeline system for Octave and Matlab2382      
  80CANDI Neuroimaging Access Point2337      
  83JIP fMRI Analysis Toolkit2245      
  86DWI/DTI Quality Control Tool: DTIPrep2154      
  87Waxholm Space Atlas2091      
  88MRI Studio2023      
  91Numerical Fibre Generator (NFG)1868      
  92GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity1862      
  93PESTICA & SLOMOCO: physio and motion correction tools1843      
  95Vaa3D and Vaa3D-Neuron1745      
  96CBS High-Res Brain Processing Tools1745      
  982008 MICCAI MS Lesion Segmentation Challenge1684