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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron372368      
  2ITK-SNAP100517      
  31000 Functional Connectomes Project78650      
  4DTI-TK64987      
  5WFU_PickAtlas24361      
  6EEGLAB23778      
  7TOADS-CRUISE Brain Segmentation Tools23703      
  8CONN : functional connectivity toolbox21097      
  9DSI Studio19928      
  10FreeSurfer17672      
  11Multi-Modal MRI Reproducibility Resource17399      
  12JIST: Java Image Science Toolkit12796      
  13Functional Imaging BIRN12344      
  14The Neuro Bureau9940      
  15MINC - Medical Image NetCDF9045      
  16BrainNet Viewer9013      
  17PANDA: a pipeline tool for diffusion MRI8539      
  18Talairach Daemon7794      
  19MRtrix7669      
  20BrainMap Database7463      
  21GIFTI7303      
  22BrainVisa Morphologist extensions7153      
  23NeuroDebian7130      
  24The IIT Human Brain Atlas (v.3.1)6900      
  25Mango6834      
  26IBSR6701      
  27Subject Order-Independent Group ICA6477      
  28Automatic Registration Toolbox6331      
  293D Slicer6180      
  30BrainVISA5818      
  31Generalized PPI Toolbox5544      
  32fMRI-CPCA5509      
  33Diffusion Toolkit / TrackVis5163      
  34BrainMask Volume Processing Tool5061      
  353DSlicerLupusLesionModule4627      
  36BioImage Suite4562      
  37FSL4479      
  38LONI Pipeline Environment4353      
  39Artifact Detection Tools (ART)4309      
  40XNAT Extras4232      
  41BrainVoyager QX4116      
  42Solar Eclipse Imaging Genetics tools4055      
  43SRI24 Atlas: Normal Adult Brain Anatomy3908      
  44Neuroimaging Made Easy Blog3868      
  45Hammer And WML Modules for 3D Slicer3837      
  46Group ICA Toolbox (GIFT and EEGIFT)3585      
  47NYU CSC TestRetest3573      
  48MITK Diffusion3545      
  49Data Format Tools3487      
  50BrainVoyager Brain Tutor3462      
  51Human Imaging Database (HID)3239      
  52Computational Morphometry Toolkit (CMTK)3239      
  53Center for Functional Neuroimaging Tech2795      
  54Maps4Mipav (Exploratory JIST) 2770      
  55HAMMER: Deformable Registration2765      
  56Spatially Constrained Parcellation2727      
  57ABSORB for groupwise registration2708      
  58FBIRN Image Processing Scripts (FIPS)2622      
  59NIfTI2594      
  60ABC (Atlas Based Classification)2534      
  61MATLAB Tutorial on Diffusion Tensor MRI2494      
  62UNC 0-1-2 Infant Atlases2413      
  63GLIRT2352      
  64SPM2273      
  65Optseq - fMRI Event Scheduler2203      
  66BrainSuite2187      
  67Task Independent Fluctuations Discussion2176      
  68MRI Defacer2174      
  69NeuroImaging Analysis Kit (NIAK)2166      
  70BXH/XCEDE Tools2153      
  71LONI Debabeler2115      
  72SPHARM-PDM Toolbox2104      
  73Network-Based Statistic (NBS)2065      
  74TumorSim2035      
  75MIPAV2019      
  76JIP fMRI Analysis Toolkit2013      
  77REX1938      
  78CANDI Neuroimaging Access Point1891      
  79Pipeline system for Octave and Matlab1877      
  80Waxholm Space Atlas1834      
  81MRI Studio1831      
  82FMRIpower1819      
  83XNAT1741      
  84Numerical Fibre Generator (NFG)1706      
  85ARCTIC1690      
  86DWI/DTI Quality Control Tool: DTIPrep1668      
  87fNIRS Data Analysis Environment1626      
  88Licensing1524      
  89Source Information Flow Toolbox1466      
  90PESTICA & SLOMOCO: physio and motion correction tools1453      
  91GRETNA1435      
  92WFU_Pipeline1397      
  93BrainSolution1371      
  94NIH Pediatric MRI Data Repository1363      
  95MRIcroGL1348      
  96DicomBrowser1344      
  973D Interactive Chemical Shift Imaging1312      
  98Gradient Non-linearity Unwarping Tool1312      
  99Slicer3 Example Modules1307      
  100Brainscape1299