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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron367268      
  2ITK-SNAP97612      
  31000 Functional Connectomes Project77536      
  4DTI-TK64698      
  5WFU_PickAtlas24058      
  6TOADS-CRUISE Brain Segmentation Tools23411      
  7EEGLAB22710      
  8CONN : functional connectivity toolbox20149      
  9DSI Studio19435      
  10Multi-Modal MRI Reproducibility Resource17033      
  11JIST: Java Image Science Toolkit12650      
  12FreeSurfer12208      
  13Functional Imaging BIRN12158      
  14The Neuro Bureau9879      
  15MINC - Medical Image NetCDF8975      
  16BrainNet Viewer8758      
  17PANDA: a pipeline tool for diffusion MRI8293      
  18Talairach Daemon7725      
  19MRtrix7570      
  20BrainMap Database7352      
  21GIFTI7155      
  22NeuroDebian6982      
  23BrainVisa Morphologist extensions6961      
  24Mango6622      
  25Subject Order-Independent Group ICA6396      
  26IBSR6376      
  27Automatic Registration Toolbox6249      
  28The IIT Human Brain Atlas (v.3.1)6131      
  293D Slicer6020      
  30BrainVISA5701      
  31fMRI-CPCA5387      
  32Generalized PPI Toolbox5227      
  33Diffusion Toolkit / TrackVis5083      
  34BrainMask Volume Processing Tool4995      
  353DSlicerLupusLesionModule4579      
  36BioImage Suite4500      
  37FSL4427      
  38LONI Pipeline Environment4316      
  39Artifact Detection Tools (ART)4238      
  40XNAT Extras4142      
  41BrainVoyager QX4069      
  42SRI24 Atlas: Normal Adult Brain Anatomy3862      
  43Hammer And WML Modules for 3D Slicer3749      
  44Solar Eclipse Imaging Genetics tools3745      
  45Neuroimaging Made Easy Blog3720      
  46NYU CSC TestRetest3460      
  47Group ICA Toolbox (GIFT and EEGIFT)3459      
  48BrainVoyager Brain Tutor3386      
  49Data Format Tools3342      
  50MITK Diffusion3235      
  51Human Imaging Database (HID)3183      
  52Computational Morphometry Toolkit (CMTK)3167      
  53Center for Functional Neuroimaging Tech2745      
  54HAMMER: Deformable Registration2742      
  55Maps4Mipav (Exploratory JIST) 2742      
  56Spatially Constrained Parcellation2610      
  57ABSORB for groupwise registration2595      
  58FBIRN Image Processing Scripts (FIPS)2581      
  59NIfTI2563      
  60ABC (Atlas Based Classification)2503      
  61MATLAB Tutorial on Diffusion Tensor MRI2448      
  62UNC 0-1-2 Infant Atlases2342      
  63GLIRT2335      
  64SPM2226      
  65Optseq - fMRI Event Scheduler2174      
  66Task Independent Fluctuations Discussion2147      
  67BrainSuite2139      
  68BXH/XCEDE Tools2137      
  69MRI Defacer2118      
  70LONI Debabeler2089      
  71SPHARM-PDM Toolbox2072      
  72NeuroImaging Analysis Kit (NIAK)2032      
  73JIP fMRI Analysis Toolkit2000      
  74MIPAV1999      
  75TumorSim1975      
  76REX1900      
  77Network-Based Statistic (NBS)1875      
  78CANDI Neuroimaging Access Point1846      
  79MRI Studio1814      
  80Pipeline system for Octave and Matlab1813      
  81Waxholm Space Atlas1794      
  82FMRIpower1775      
  83XNAT1714      
  84Numerical Fibre Generator (NFG)1688      
  85ARCTIC1684      
  86DWI/DTI Quality Control Tool: DTIPrep1619      
  87Licensing1484      
  88PESTICA & SLOMOCO: physio and motion correction tools1405      
  89fNIRS Data Analysis Environment1397      
  90GRETNA1363      
  91BrainSolution1354      
  92NIH Pediatric MRI Data Repository1343      
  93WFU_Pipeline1335      
  94Source Information Flow Toolbox1332      
  95Slicer3 Example Modules1293      
  96DicomBrowser1293      
  973D Interactive Chemical Shift Imaging1290      
  98Gradient Non-linearity Unwarping Tool1278      
  99Brainscape1269      
  100xjView, a viewing tool for SPM1174