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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron334843      
  2ITK-SNAP80080      
  31000 Functional Connectomes Project71638      
  4DTI-TK62633      
  5WFU_PickAtlas22202      
  6TOADS-CRUISE Brain Segmentation Tools21566      
  7DSI Studio16048      
  8EEGLAB15812      
  9Multi-Modal MRI Reproducibility Resource15295      
  10CONN : functional connectivity toolbox14409      
  11JIST: Java Image Science Toolkit11779      
  12Functional Imaging BIRN11016      
  13The Neuro Bureau9113      
  14MINC - Medical Image NetCDF8169      
  15Talairach Daemon7287      
  16BrainNet Viewer7112      
  17BrainMap Database7039      
  18MRtrix6929      
  19PANDA: a pipeline tool for diffusion MRI6831      
  20GIFTI6429      
  21Subject Order-Independent Group ICA6103      
  22BrainVisa Morphology extensions6085      
  23NeuroDebian5935      
  24Automatic Registration Toolbox5456      
  253D Slicer5262      
  26Mango5162      
  27BrainVISA5088      
  28fMRI-CPCA4847      
  29BrainMask Volume Processing Tool4665      
  30Diffusion Toolkit / TrackVis4456      
  31LONI Pipeline Environment4408      
  323DSlicerLupusLesionModule4321      
  33FSL4228      
  34IBSR4198      
  35BioImage Suite4142      
  36BrainVoyager QX3932      
  37The IIT Human Brain Atlas (v.3)3760      
  38SRI24 Atlas: Normal Adult Brain Anatomy3606      
  39Artifact Detection Tools (ART)3538      
  40XNAT Extras3494      
  41Hammer And WML Modules for 3D Slicer3332      
  42BrainVoyager Brain Tutor3153      
  43NYU CSC TestRetest2962      
  44Human Imaging Database (HID)2946      
  45Generalized PPI Toolbox2894      
  46Neuroimaging Made Easy Blog2810      
  47Computational Morphometry Toolkit (CMTK)2756      
  48Group ICA Toolbox (GIFT and EEGIFT)2728      
  49HAMMER: Deformable Registration2585      
  50Maps4Mipav (Exploratory JIST) 2521      
  51Data Format Tools2490      
  52Center for Functional Neuroimaging Tech2486      
  53NIfTI2412      
  54FBIRN Image Processing Scripts (FIPS)2322      
  55ABC (Atlas Based Classification)2291      
  56Solar Eclipse Imaging Genetics tools2288      
  57GLIRT2216      
  58ABSORB for groupwise registration2183      
  59MATLAB Tutorial on Diffusion Tensor MRI2120      
  60Optseq - fMRI Event Scheduler2028      
  61LONI Debabeler1970      
  62Task Independent Fluctuations Discussion1951      
  63Spatially Constrained Parcellation1947      
  64SPM1947      
  65MITK Diffusion1946      
  66UNC 0-1-2 Infant Atlases1918      
  67BrainSuite1916      
  68MIPAV1884      
  69MRI Defacer1883      
  70BXH/XCEDE Tools1861      
  71JIP fMRI Analysis Toolkit1859      
  72SPHARM-PDM Toolbox1722      
  73REX1676      
  74MRI Studio1653      
  75TumorSim1639      
  76CANDI Neuroimaging Access Point1619      
  77ARCTIC1618      
  78Waxholm Space Atlas1605      
  79XNAT1559      
  80Numerical Fibre Generator (NFG)1508      
  81FMRIpower1488      
  82NeuroImaging Analysis Kit (NIAK)1427      
  83Pipeline system for Octave and Matlab1423      
  84Licensing1328      
  85DWI/DTI Quality Control Tool: DTIPrep1232      
  86BrainSolution1210      
  87WFU_Pipeline1205      
  88NIH Pediatric MRI Data Repository1199      
  89Vaa3D and Vaa3D-Neuron1180      
  903D Interactive Chemical Shift Imaging1153      
  91Slicer3 Example Modules1152      
  92BRAINSFit1135      
  93Brainscape1130      
  94PESTICA fMRI Physio Detection/Correction1126      
  95Gradient Non-linearity Unwarping Tool1121      
  96BrainParser1096      
  97xjView, a viewing tool for SPM1080      
  98Quantitative Diffusion Tools1051      
  99DicomBrowser1026      
  100SnPM1001