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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron355371      
  2ITK-SNAP91238      
  31000 Functional Connectomes Project76117      
  4DTI-TK63966      
  5WFU_PickAtlas23501      
  6TOADS-CRUISE Brain Segmentation Tools22846      
  7EEGLAB20347      
  8DSI Studio18314      
  9CONN : functional connectivity toolbox18103      
  10Multi-Modal MRI Reproducibility Resource16749      
  11JIST: Java Image Science Toolkit12432      
  12Functional Imaging BIRN11897      
  13The Neuro Bureau9499      
  14MINC - Medical Image NetCDF9028      
  15BrainNet Viewer8175      
  16PANDA: a pipeline tool for diffusion MRI7832      
  17Talairach Daemon7619      
  18MRtrix7367      
  19BrainMap Database7222      
  20GIFTI6931      
  21NeuroDebian6816      
  22BrainVisa Morphologist extensions6779      
  23Subject Order-Independent Group ICA6309      
  24Mango6153      
  25Automatic Registration Toolbox5967      
  263D Slicer5875      
  27IBSR5695      
  28BrainVISA5640      
  29The IIT Human Brain Atlas (v.3.1)5282      
  30fMRI-CPCA5256      
  31Diffusion Toolkit / TrackVis4946      
  32BrainMask Volume Processing Tool4915      
  33LONI Pipeline Environment4564      
  343DSlicerLupusLesionModule4543      
  35BioImage Suite4461      
  36FSL4458      
  37Generalized PPI Toolbox4313      
  38BrainVoyager QX4142      
  39XNAT Extras4113      
  40Artifact Detection Tools (ART)3992      
  41SRI24 Atlas: Normal Adult Brain Anatomy3806      
  42Hammer And WML Modules for 3D Slicer3667      
  43Neuroimaging Made Easy Blog3381      
  44BrainVoyager Brain Tutor3353      
  45NYU CSC TestRetest3299      
  46Group ICA Toolbox (GIFT and EEGIFT)3214      
  47Solar Eclipse Imaging Genetics tools3213      
  48Human Imaging Database (HID)3188      
  49Computational Morphometry Toolkit (CMTK)3022      
  50Data Format Tools3015      
  51MITK Diffusion2869      
  52Center for Functional Neuroimaging Tech2719      
  53HAMMER: Deformable Registration2693      
  54Maps4Mipav (Exploratory JIST) 2680      
  55NIfTI2564      
  56FBIRN Image Processing Scripts (FIPS)2533      
  57ABC (Atlas Based Classification)2461      
  58ABSORB for groupwise registration2445      
  59Spatially Constrained Parcellation2416      
  60MATLAB Tutorial on Diffusion Tensor MRI2347      
  61GLIRT2299      
  62UNC 0-1-2 Infant Atlases2236      
  63Optseq - fMRI Event Scheduler2166      
  64BrainSuite2165      
  65SPM2147      
  66LONI Debabeler2129      
  67Task Independent Fluctuations Discussion2099      
  68MRI Defacer2091      
  69BXH/XCEDE Tools2031      
  70MIPAV1978      
  71JIP fMRI Analysis Toolkit1969      
  72SPHARM-PDM Toolbox1918      
  73TumorSim1859      
  74CANDI Neuroimaging Access Point1846      
  75REX1845      
  76FreeSurfer1797      
  77NeuroImaging Analysis Kit (NIAK)1788      
  78Waxholm Space Atlas1779      
  79MRI Studio1766      
  80Pipeline system for Octave and Matlab1718      
  81XNAT1693      
  82FMRIpower1682      
  83ARCTIC1661      
  84Numerical Fibre Generator (NFG)1646      
  85Licensing1536      
  86DWI/DTI Quality Control Tool: DTIPrep1480      
  87Network-Based Statistic (NBS)1431      
  88BrainSolution1345      
  89PESTICA & SLOMOCO: physio and motion correction tools1321      
  90NIH Pediatric MRI Data Repository1321      
  91WFU_Pipeline1277      
  923D Interactive Chemical Shift Imaging1260      
  93Brainscape1249      
  94Slicer3 Example Modules1248      
  95Gradient Non-linearity Unwarping Tool1242      
  96Vaa3D and Vaa3D-Neuron1188      
  97GRETNA1182      
  98DicomBrowser1172      
  99xjView, a viewing tool for SPM1135      
  100BRAINSFit1135