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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron335633      
  2ITK-SNAP80337      
  31000 Functional Connectomes Project71857      
  4DTI-TK62680      
  5WFU_PickAtlas22263      
  6TOADS-CRUISE Brain Segmentation Tools21633      
  7DSI Studio16130      
  8EEGLAB15987      
  9Multi-Modal MRI Reproducibility Resource15308      
  10CONN : functional connectivity toolbox14543      
  11JIST: Java Image Science Toolkit11810      
  12Functional Imaging BIRN11040      
  13The Neuro Bureau9136      
  14MINC - Medical Image NetCDF8197      
  15Talairach Daemon7290      
  16BrainNet Viewer7136      
  17BrainMap Database7040      
  18MRtrix6939      
  19PANDA: a pipeline tool for diffusion MRI6873      
  20GIFTI6443      
  21Subject Order-Independent Group ICA6101      
  22BrainVisa Morphology extensions6098      
  23NeuroDebian5967      
  24Automatic Registration Toolbox5476      
  253D Slicer5286      
  26Mango5193      
  27BrainVISA5100      
  28fMRI-CPCA4849      
  29BrainMask Volume Processing Tool4677      
  30Diffusion Toolkit / TrackVis4480      
  31LONI Pipeline Environment4413      
  323DSlicerLupusLesionModule4337      
  33IBSR4249      
  34FSL4233      
  35BioImage Suite4148      
  36BrainVoyager QX3940      
  37The IIT Human Brain Atlas (v.3)3784      
  38SRI24 Atlas: Normal Adult Brain Anatomy3630      
  39Artifact Detection Tools (ART)3552      
  40XNAT Extras3505      
  41Hammer And WML Modules for 3D Slicer3350      
  42BrainVoyager Brain Tutor3158      
  43NYU CSC TestRetest2978      
  44Generalized PPI Toolbox2962      
  45Human Imaging Database (HID)2949      
  46Neuroimaging Made Easy Blog2831      
  47Computational Morphometry Toolkit (CMTK)2774      
  48Group ICA Toolbox (GIFT and EEGIFT)2742      
  49HAMMER: Deformable Registration2590      
  50Maps4Mipav (Exploratory JIST) 2520      
  51Data Format Tools2494      
  52Center for Functional Neuroimaging Tech2484      
  53NIfTI2413      
  54FBIRN Image Processing Scripts (FIPS)2330      
  55Solar Eclipse Imaging Genetics tools2326      
  56ABC (Atlas Based Classification)2294      
  57GLIRT2211      
  58ABSORB for groupwise registration2193      
  59MATLAB Tutorial on Diffusion Tensor MRI2131      
  60Optseq - fMRI Event Scheduler2025      
  61LONI Debabeler1976      
  62Spatially Constrained Parcellation1968      
  63MITK Diffusion1957      
  64SPM1956      
  65Task Independent Fluctuations Discussion1955      
  66BrainSuite1916      
  67UNC 0-1-2 Infant Atlases1913      
  68MIPAV1891      
  69MRI Defacer1888      
  70JIP fMRI Analysis Toolkit1871      
  71BXH/XCEDE Tools1866      
  72SPHARM-PDM Toolbox1722      
  73REX1677      
  74TumorSim1660      
  75MRI Studio1658      
  76CANDI Neuroimaging Access Point1622      
  77ARCTIC1614      
  78Waxholm Space Atlas1605      
  79XNAT1560      
  80Numerical Fibre Generator (NFG)1523      
  81FMRIpower1494      
  82NeuroImaging Analysis Kit (NIAK)1429      
  83Pipeline system for Octave and Matlab1427      
  84Licensing1329      
  85DWI/DTI Quality Control Tool: DTIPrep1243      
  86BrainSolution1208      
  87WFU_Pipeline1204      
  88NIH Pediatric MRI Data Repository1198      
  89Vaa3D and Vaa3D-Neuron1180      
  903D Interactive Chemical Shift Imaging1157      
  91Slicer3 Example Modules1154      
  92BRAINSFit1135      
  93Brainscape1134      
  94PESTICA fMRI Physio Detection/Correction1128      
  95Gradient Non-linearity Unwarping Tool1122      
  96BrainParser1096      
  97xjView, a viewing tool for SPM1081      
  98Quantitative Diffusion Tools1048      
  99DicomBrowser1031      
  100Network-Based Statistic (NBS)1003