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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron449542      
  2ITK-SNAP139127      
  31000 Functional Connectomes Project93045      
  4DTI-TK68795      
  5EEGLAB38057      
  6CONN : functional connectivity toolbox35746      
  7FreeSurfer34899      
  8WFU_PickAtlas28088      
  9TOADS-CRUISE Brain Segmentation Tools26857      
  10DSI Studio25477      
  11Multi-Modal MRI Reproducibility Resource22379      
  12IIT Human Brain Atlas (v.4.1)17002      
  13Nilearn15661      
  14JIST: Java Image Science Toolkit14727      
  15Functional Imaging BIRN14678      
  16BrainNet Viewer13501      
  17PANDA: a pipeline tool for diffusion MRI12645      
  18The Neuro Bureau12644      
  19IBSR11863      
  20MINC - Medical Image NetCDF10302      
  21Generalized PPI Toolbox10171      
  22BrainVisa Morphologist extensions9450      
  23NeuroDebian9207      
  24GIFTI9201      
  25MRtrix8664      
  26Mango8543      
  27Talairach Daemon8480      
  28MRIcroGL8428      
  29BrainMap Database8398      
  303D Slicer8297      
  31Solar Eclipse Imaging Genetics tools7887      
  32Automatic Registration Toolbox7464      
  33BrainVISA7428      
  34MITK Diffusion7141      
  35Subject Order-Independent Group ICA7126      
  36BioImage Suite6851      
  37fMRI-CPCA6719      
  38Diffusion Toolkit / TrackVis6412      
  39BrainMask Volume Processing Tool5975      
  40Neuroimaging Made Easy Blog5928      
  41Artifact Detection Tools (ART)5677      
  42XNAT Extras5597      
  433DSlicerLupusLesionModule5383      
  44FSL5302      
  45NYU CSC TestRetest5030      
  46Hammer And WML Modules for 3D Slicer4986      
  47BrainVoyager4943      
  48Data Format Tools4899      
  49Group ICA Toolbox (GIFT and EEGIFT)4890      
  50LONI Pipeline Environment4662      
  51Spatially Constrained Parcellation4508      
  52SRI24 Atlas: Normal Adult Brain Anatomy4474      
  53Computational Morphometry Toolkit (CMTK)4444      
  54fNIRS Data Analysis Environment4312      
  55BrainVoyager Brain Tutor4072      
  56Human Imaging Database (HID)3966      
  57NeuroImaging Analysis Kit (NIAK)3796      
  58Network-Based Statistic (NBS)3722      
  59UNC 0-1-2 Infant Atlases3713      
  60Center for Functional Neuroimaging Tech3516      
  61ABSORB for groupwise registration3260      
  62FBIRN Image Processing Scripts (FIPS)3225      
  63MATLAB Tutorial on Diffusion Tensor MRI3206      
  64SPM3134      
  65HAMMER: Deformable Registration3132      
  66NIfTI3119      
  67Source Information Flow Toolbox3090      
  68Maps4Mipav (Exploratory JIST) 2996      
  69GRETNA2966      
  70TumorSim2956      
  71ABC (Atlas Based Classification)2908      
  72SPHARM-PDM Toolbox2840      
  73MRI Defacer2797      
  74BXH/XCEDE Tools2794      
  75BrainSuite2657      
  76Optseq - fMRI Event Scheduler2656      
  77GLIRT2643      
  78Pipeline system for Octave and Matlab2548      
  79LONI Debabeler2545      
  80Task Independent Fluctuations Discussion2542      
  81CANDI Neuroimaging Access Point2505      
  82REX2493      
  83GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity2476      
  84FMRIpower2459      
  85DWI/DTI Quality Control Tool: DTIPrep2375      
  86Vaa3D and Vaa3D-Neuron2347      
  87JIP fMRI Analysis Toolkit2344      
  88Waxholm Space Atlas2286      
  89MIPAV2274      
  90CBS High-Res Brain Processing Tools2170      
  912008 MICCAI MS Lesion Segmentation Challenge2156      
  92MRI Studio2141      
  93XNAT2127      
  94Licensing2075      
  95PESTICA & SLOMOCO: physio and motion correction tools2054      
  96Numerical Fibre Generator (NFG)2046      
  97DicomBrowser1989      
  98iBEAT1971      
  99ARCTIC1913      
  100MARS (Multi-Atlas Robust Segmentation)1910