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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron359470      
  2ITK-SNAP93116      
  31000 Functional Connectomes Project75881      
  4DTI-TK64153      
  5WFU_PickAtlas23574      
  6TOADS-CRUISE Brain Segmentation Tools22963      
  7EEGLAB20970      
  8CONN : functional connectivity toolbox18747      
  9DSI Studio18746      
  10Multi-Modal MRI Reproducibility Resource16492      
  11JIST: Java Image Science Toolkit12498      
  12Functional Imaging BIRN11831      
  13The Neuro Bureau9599      
  14MINC - Medical Image NetCDF8827      
  15BrainNet Viewer8369      
  16PANDA: a pipeline tool for diffusion MRI7931      
  17Talairach Daemon7633      
  18MRtrix7405      
  19BrainMap Database7232      
  20GIFTI6970      
  21NeuroDebian6733      
  22BrainVisa Morphologist extensions6685      
  23Subject Order-Independent Group ICA6311      
  24Mango6307      
  25Automatic Registration Toolbox6026      
  26IBSR5862      
  273D Slicer5827      
  28BrainVISA5509      
  29The IIT Human Brain Atlas (v.3.1)5506      
  30fMRI-CPCA5253      
  31Diffusion Toolkit / TrackVis4909      
  32BrainMask Volume Processing Tool4887      
  33Generalized PPI Toolbox4609      
  343DSlicerLupusLesionModule4517      
  35BioImage Suite4397      
  36FSL4355      
  37LONI Pipeline Environment4285      
  38Artifact Detection Tools (ART)4095      
  39BrainVoyager QX4016      
  40FreeSurfer3997      
  41XNAT Extras3936      
  42SRI24 Atlas: Normal Adult Brain Anatomy3821      
  43Hammer And WML Modules for 3D Slicer3661      
  44Neuroimaging Made Easy Blog3513      
  45Solar Eclipse Imaging Genetics tools3383      
  46NYU CSC TestRetest3370      
  47BrainVoyager Brain Tutor3318      
  48Group ICA Toolbox (GIFT and EEGIFT)3286      
  49Human Imaging Database (HID)3110      
  50Computational Morphometry Toolkit (CMTK)3084      
  51Data Format Tools3033      
  52MITK Diffusion2955      
  53Maps4Mipav (Exploratory JIST) 2711      
  54HAMMER: Deformable Registration2686      
  55Center for Functional Neuroimaging Tech2658      
  56FBIRN Image Processing Scripts (FIPS)2527      
  57NIfTI2491      
  58Spatially Constrained Parcellation2459      
  59ABC (Atlas Based Classification)2456      
  60ABSORB for groupwise registration2454      
  61MATLAB Tutorial on Diffusion Tensor MRI2366      
  62GLIRT2313      
  63UNC 0-1-2 Infant Atlases2231      
  64SPM2139      
  65Optseq - fMRI Event Scheduler2116      
  66Task Independent Fluctuations Discussion2096      
  67BXH/XCEDE Tools2076      
  68BrainSuite2068      
  69MRI Defacer2050      
  70LONI Debabeler2039      
  71JIP fMRI Analysis Toolkit1982      
  72MIPAV1971      
  73SPHARM-PDM Toolbox1967      
  74TumorSim1890      
  75REX1838      
  76NeuroImaging Analysis Kit (NIAK)1828      
  77CANDI Neuroimaging Access Point1812      
  78MRI Studio1772      
  79Waxholm Space Atlas1734      
  80Pipeline system for Octave and Matlab1714      
  81FMRIpower1706      
  82ARCTIC1675      
  83XNAT1673      
  84Numerical Fibre Generator (NFG)1668      
  85Network-Based Statistic (NBS)1591      
  86DWI/DTI Quality Control Tool: DTIPrep1546      
  87Licensing1425      
  88PESTICA & SLOMOCO: physio and motion correction tools1347      
  89BrainSolution1312      
  90NIH Pediatric MRI Data Repository1305      
  91WFU_Pipeline1290      
  923D Interactive Chemical Shift Imaging1268      
  93Slicer3 Example Modules1268      
  94Gradient Non-linearity Unwarping Tool1248      
  95GRETNA1232      
  96Brainscape1226      
  97DicomBrowser1226      
  98Source Information Flow Toolbox1156      
  99xjView, a viewing tool for SPM1146      
  100BrainParser1133