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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron378788      
  2ITK-SNAP103114      
  31000 Functional Connectomes Project79088      
  4DTI-TK65236      
  5EEGLAB24713      
  6WFU_PickAtlas24673      
  7TOADS-CRUISE Brain Segmentation Tools23950      
  8CONN : functional connectivity toolbox21851      
  9DSI Studio20309      
  10FreeSurfer19727      
  11Multi-Modal MRI Reproducibility Resource17667      
  12JIST: Java Image Science Toolkit12985      
  13Functional Imaging BIRN12517      
  14The Neuro Bureau10259      
  15BrainNet Viewer9281      
  16MINC - Medical Image NetCDF9113      
  17PANDA: a pipeline tool for diffusion MRI8725      
  18Talairach Daemon7852      
  19MRtrix7754      
  20BrainMap Database7537      
  21GIFTI7466      
  22The IIT Human Brain Atlas (v.3.2)7292      
  23BrainVisa Morphologist extensions7231      
  24NeuroDebian7210      
  25IBSR7122      
  26Mango7040      
  27Subject Order-Independent Group ICA6527      
  28Automatic Registration Toolbox6434      
  293D Slicer6290      
  30BrainVISA5928      
  31Generalized PPI Toolbox5838      
  32fMRI-CPCA5596      
  33Diffusion Toolkit / TrackVis5235      
  34BrainMask Volume Processing Tool5173      
  353DSlicerLupusLesionModule4675      
  36BioImage Suite4609      
  37FSL4518      
  38Artifact Detection Tools (ART)4381      
  39LONI Pipeline Environment4365      
  40XNAT Extras4322      
  41Solar Eclipse Imaging Genetics tools4259      
  42BrainVoyager QX4160      
  43Neuroimaging Made Easy Blog4002      
  44SRI24 Atlas: Normal Adult Brain Anatomy3955      
  45Hammer And WML Modules for 3D Slicer3927      
  46MITK Diffusion3763      
  47Group ICA Toolbox (GIFT and EEGIFT)3682      
  48NYU CSC TestRetest3660      
  49Data Format Tools3580      
  50BrainVoyager Brain Tutor3506      
  51Computational Morphometry Toolkit (CMTK)3356      
  52Human Imaging Database (HID)3281      
  53Center for Functional Neuroimaging Tech2836      
  54Spatially Constrained Parcellation2822      
  55Maps4Mipav (Exploratory JIST) 2786      
  56HAMMER: Deformable Registration2785      
  57ABSORB for groupwise registration2753      
  58FBIRN Image Processing Scripts (FIPS)2659      
  59NIfTI2621      
  60ABC (Atlas Based Classification)2551      
  61MATLAB Tutorial on Diffusion Tensor MRI2535      
  62UNC 0-1-2 Infant Atlases2467      
  63GLIRT2377      
  64SPM2315      
  65NeuroImaging Analysis Kit (NIAK)2255      
  66Optseq - fMRI Event Scheduler2217      
  67BrainSuite2214      
  68MRI Defacer2205      
  69Network-Based Statistic (NBS)2201      
  70BXH/XCEDE Tools2194      
  71Task Independent Fluctuations Discussion2193      
  72SPHARM-PDM Toolbox2137      
  73LONI Debabeler2130      
  74TumorSim2094      
  75JIP fMRI Analysis Toolkit2057      
  76MIPAV2041      
  77REX1966      
  78CANDI Neuroimaging Access Point1917      
  79Pipeline system for Octave and Matlab1908      
  80FMRIpower1871      
  81Waxholm Space Atlas1853      
  82MRI Studio1846      
  83MRIcroGL1811      
  84fNIRS Data Analysis Environment1800      
  85XNAT1755      
  86DWI/DTI Quality Control Tool: DTIPrep1718      
  87Numerical Fibre Generator (NFG)1717      
  88ARCTIC1703      
  89Source Information Flow Toolbox1577      
  90Licensing1539      
  91PESTICA & SLOMOCO: physio and motion correction tools1500      
  92GRETNA1479      
  93WFU_Pipeline1420      
  94DicomBrowser1415      
  95BrainSolution1395      
  96NIH Pediatric MRI Data Repository1381      
  97Gradient Non-linearity Unwarping Tool1338      
  983D Interactive Chemical Shift Imaging1337      
  99Brainscape1329      
  100Slicer3 Example Modules1319