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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron433218      
  2ITK-SNAP130084      
  31000 Functional Connectomes Project88372      
  4DTI-TK67963      
  5EEGLAB35224      
  6FreeSurfer32916      
  7CONN : functional connectivity toolbox31778      
  8WFU_PickAtlas27201      
  9TOADS-CRUISE Brain Segmentation Tools26138      
  10DSI Studio24342      
  11Multi-Modal MRI Reproducibility Resource21325      
  12IIT Human Brain Atlas (v.4.1)14930      
  13JIST: Java Image Science Toolkit14330      
  14Functional Imaging BIRN14135      
  15BrainNet Viewer12337      
  16The Neuro Bureau11937      
  17PANDA: a pipeline tool for diffusion MRI11703      
  18IBSR10541      
  19MINC - Medical Image NetCDF10024      
  20Generalized PPI Toolbox9154      
  21BrainVisa Morphologist extensions9016      
  22NiLearn8906      
  23NeuroDebian8724      
  24GIFTI8719      
  25MRtrix8452      
  26Talairach Daemon8328      
  27BrainMap Database8215      
  28Mango8190      
  293D Slicer7761      
  30Automatic Registration Toolbox7361      
  31BrainVISA7059      
  32Subject Order-Independent Group ICA6969      
  33Solar Eclipse Imaging Genetics tools6834      
  34fMRI-CPCA6375      
  35MITK Diffusion6337      
  36MRIcroGL6184      
  37Diffusion Toolkit / TrackVis6106      
  38BioImage Suite6044      
  39BrainMask Volume Processing Tool5791      
  40Neuroimaging Made Easy Blog5392      
  41Artifact Detection Tools (ART)5370      
  42XNAT Extras5291      
  433DSlicerLupusLesionModule5246      
  44FSL5128      
  45Hammer And WML Modules for 3D Slicer4744      
  46BrainVoyager4737      
  47Group ICA Toolbox (GIFT and EEGIFT)4597      
  48LONI Pipeline Environment4593      
  49NYU CSC TestRetest4589      
  50Data Format Tools4558      
  51SRI24 Atlas: Normal Adult Brain Anatomy4356      
  52Computational Morphometry Toolkit (CMTK)4145      
  53Spatially Constrained Parcellation4026      
  54BrainVoyager Brain Tutor3899      
  55Human Imaging Database (HID)3822      
  56fNIRS Data Analysis Environment3394      
  57NeuroImaging Analysis Kit (NIAK)3370      
  58UNC 0-1-2 Infant Atlases3321      
  59Center for Functional Neuroimaging Tech3310      
  60Network-Based Statistic (NBS)3290      
  61ABSORB for groupwise registration3117      
  62FBIRN Image Processing Scripts (FIPS)3099      
  63HAMMER: Deformable Registration3062      
  64MATLAB Tutorial on Diffusion Tensor MRI3026      
  65NIfTI3003      
  66Maps4Mipav (Exploratory JIST) 2962      
  67SPM2883      
  68ABC (Atlas Based Classification)2805      
  69TumorSim2764      
  70Source Information Flow Toolbox2684      
  71SPHARM-PDM Toolbox2679      
  72MRI Defacer2660      
  73BXH/XCEDE Tools2648      
  74GLIRT2591      
  75GRETNA2561      
  76Optseq - fMRI Event Scheduler2549      
  77BrainSuite2520      
  78Task Independent Fluctuations Discussion2465      
  79LONI Debabeler2464      
  80Pipeline system for Octave and Matlab2450      
  81CANDI Neuroimaging Access Point2401      
  82REX2339      
  83FMRIpower2302      
  84JIP fMRI Analysis Toolkit2284      
  85DWI/DTI Quality Control Tool: DTIPrep2219      
  86MIPAV2215      
  87Waxholm Space Atlas2152      
  88GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity2103      
  89MRI Studio2063      
  90XNAT2024      
  91Vaa3D and Vaa3D-Neuron1973      
  92Licensing1952      
  93Numerical Fibre Generator (NFG)1950      
  94PESTICA & SLOMOCO: physio and motion correction tools1940      
  95CBS High-Res Brain Processing Tools1895      
  96ARCTIC1856      
  972008 MICCAI MS Lesion Segmentation Challenge1849      
  98DicomBrowser1808      
  99iBEAT1761      
  100MARS (Multi-Atlas Robust Segmentation)1682