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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron393251      
  2ITK-SNAP109194      
  31000 Functional Connectomes Project81114      
  4DTI-TK65979      
  5EEGLAB27293      
  6FreeSurfer25435      
  7WFU_PickAtlas25335      
  8TOADS-CRUISE Brain Segmentation Tools24629      
  9CONN : functional connectivity toolbox23841      
  10DSI Studio21401      
  11Multi-Modal MRI Reproducibility Resource18545      
  12JIST: Java Image Science Toolkit13346      
  13Functional Imaging BIRN12944      
  14The Neuro Bureau10610      
  15BrainNet Viewer10037      
  16PANDA: a pipeline tool for diffusion MRI9468      
  17MINC - Medical Image NetCDF9327      
  18The IIT Human Brain Atlas (v.4.0)8746      
  19IBSR8086      
  20Talairach Daemon8001      
  21MRtrix7964      
  22BrainVisa Morphologist extensions7906      
  23GIFTI7785      
  24BrainMap Database7701      
  25NeuroDebian7585      
  26Mango7352      
  27Generalized PPI Toolbox6697      
  28Subject Order-Independent Group ICA6672      
  293D Slicer6671      
  30Automatic Registration Toolbox6658      
  31BrainVISA6265      
  32fMRI-CPCA5822      
  33Diffusion Toolkit / TrackVis5486      
  34BrainMask Volume Processing Tool5348      
  35Solar Eclipse Imaging Genetics tools4888      
  363DSlicerLupusLesionModule4779      
  37BioImage Suite4758      
  38FSL4652      
  39Artifact Detection Tools (ART)4580      
  40XNAT Extras4542      
  41MITK Diffusion4517      
  42LONI Pipeline Environment4434      
  43Neuroimaging Made Easy Blog4315      
  44BrainVoyager QX4292      
  45Hammer And WML Modules for 3D Slicer4124      
  46SRI24 Atlas: Normal Adult Brain Anatomy4041      
  47Group ICA Toolbox (GIFT and EEGIFT)3928      
  48Data Format Tools3852      
  49NYU CSC TestRetest3812      
  50BrainVoyager Brain Tutor3599      
  51Computational Morphometry Toolkit (CMTK)3575      
  52Human Imaging Database (HID)3407      
  53Spatially Constrained Parcellation3104      
  54Center for Functional Neuroimaging Tech2967      
  55HAMMER: Deformable Registration2885      
  56ABSORB for groupwise registration2879      
  57Maps4Mipav (Exploratory JIST) 2837      
  58MRIcroGL2832      
  59FBIRN Image Processing Scripts (FIPS)2820      
  60NIfTI2724      
  61MATLAB Tutorial on Diffusion Tensor MRI2665      
  62UNC 0-1-2 Infant Atlases2664      
  63ABC (Atlas Based Classification)2622      
  64NeuroImaging Analysis Kit (NIAK)2523      
  65Network-Based Statistic (NBS)2520      
  66SPM2449      
  67GLIRT2433      
  68MRI Defacer2371      
  69BrainSuite2303      
  70SPHARM-PDM Toolbox2295      
  71LONI Debabeler2287      
  72Optseq - fMRI Event Scheduler2284      
  73BXH/XCEDE Tools2280      
  74Task Independent Fluctuations Discussion2266      
  75TumorSim2234      
  76fNIRS Data Analysis Environment2181      
  77JIP fMRI Analysis Toolkit2102      
  78MIPAV2085      
  79REX2065      
  80CANDI Neuroimaging Access Point2060      
  81Pipeline system for Octave and Matlab2029      
  82FMRIpower1980      
  83Waxholm Space Atlas1928      
  84MRI Studio1890      
  85DWI/DTI Quality Control Tool: DTIPrep1851      
  86Source Information Flow Toolbox1836      
  87XNAT1824      
  88Numerical Fibre Generator (NFG)1749      
  89ARCTIC1736      
  90GRETNA1735      
  91Licensing1640      
  92PESTICA & SLOMOCO: physio and motion correction tools1619      
  93DicomBrowser1509      
  94BrainSolution1461      
  95NIH Pediatric MRI Data Repository1451      
  96WFU_Pipeline1447      
  97Gradient Non-linearity Unwarping Tool1398      
  98Brainscape1370      
  993D Interactive Chemical Shift Imaging1369      
  100Slicer3 Example Modules1352