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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron453339      
  2ITK-SNAP141816      
  31000 Functional Connectomes Project94408      
  4DTI-TK69033      
  5EEGLAB38087      
  6CONN : functional connectivity toolbox36889      
  7FreeSurfer35318      
  8WFU_PickAtlas28327      
  9TOADS-CRUISE Brain Segmentation Tools27020      
  10DSI Studio25847      
  11Multi-Modal MRI Reproducibility Resource22686      
  12Nilearn18506      
  13IIT Human Brain Atlas (v.4.1)17317      
  14JIST: Java Image Science Toolkit14861      
  15Functional Imaging BIRN14821      
  16BrainNet Viewer13810      
  17PANDA: a pipeline tool for diffusion MRI12861      
  18The Neuro Bureau12815      
  19IBSR12141      
  20Generalized PPI Toolbox10479      
  21MINC - Medical Image NetCDF10374      
  22BrainVisa Morphologist extensions9565      
  23NeuroDebian9352      
  24GIFTI9351      
  25MRIcroGL9141      
  26MRtrix8698      
  27Mango8657      
  28Talairach Daemon8512      
  29BrainMap Database8454      
  303D Slicer8449      
  31Solar Eclipse Imaging Genetics tools8135      
  32BrainVISA7513      
  33Automatic Registration Toolbox7502      
  34MITK Diffusion7391      
  35Subject Order-Independent Group ICA7167      
  36BioImage Suite7095      
  37fMRI-CPCA6807      
  38Diffusion Toolkit / TrackVis6494      
  39Neuroimaging Made Easy Blog6119      
  40BrainMask Volume Processing Tool6026      
  41Artifact Detection Tools (ART)5749      
  42XNAT Extras5691      
  433DSlicerLupusLesionModule5431      
  44FSL5356      
  45NYU CSC TestRetest5175      
  46BrainVoyager5045      
  47Hammer And WML Modules for 3D Slicer5045      
  48Data Format Tools5000      
  49Group ICA Toolbox (GIFT and EEGIFT)4960      
  50LONI Pipeline Environment4699      
  51fNIRS Data Analysis Environment4618      
  52Spatially Constrained Parcellation4611      
  53Computational Morphometry Toolkit (CMTK)4504      
  54SRI24 Atlas: Normal Adult Brain Anatomy4497      
  55BrainVoyager Brain Tutor4122      
  56Human Imaging Database (HID)4027      
  57NeuroImaging Analysis Kit (NIAK)3947      
  58Network-Based Statistic (NBS)3827      
  59UNC 0-1-2 Infant Atlases3818      
  60Center for Functional Neuroimaging Tech3580      
  61ABSORB for groupwise registration3291      
  62FBIRN Image Processing Scripts (FIPS)3275      
  63MATLAB Tutorial on Diffusion Tensor MRI3253      
  64SPM3221      
  65Source Information Flow Toolbox3182      
  66NIfTI3160      
  67HAMMER: Deformable Registration3150      
  68GRETNA3076      
  69Maps4Mipav (Exploratory JIST) 3004      
  70TumorSim2989      
  71ABC (Atlas Based Classification)2928      
  72SPHARM-PDM Toolbox2887      
  73MRI Defacer2872      
  74BXH/XCEDE Tools2829      
  75BrainSuite2698      
  76Optseq - fMRI Event Scheduler2688      
  77GLIRT2656      
  78LONI Debabeler2573      
  79Task Independent Fluctuations Discussion2569      
  80Pipeline system for Octave and Matlab2566      
  81CANDI Neuroimaging Access Point2564      
  82REX2544      
  83GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity2540      
  84FMRIpower2505      
  85Vaa3D and Vaa3D-Neuron2500      
  86DWI/DTI Quality Control Tool: DTIPrep2417      
  87JIP fMRI Analysis Toolkit2351      
  88Waxholm Space Atlas2321      
  89MIPAV2295      
  902008 MICCAI MS Lesion Segmentation Challenge2239      
  91CBS High-Res Brain Processing Tools2227      
  92MRI Studio2177      
  93XNAT2152      
  94Licensing2104      
  95PESTICA & SLOMOCO: physio and motion correction tools2082      
  96Numerical Fibre Generator (NFG)2070      
  97iBEAT2057      
  98DicomBrowser2031      
  99MARS (Multi-Atlas Robust Segmentation)1980      
  100age-ility1955