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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron358863      
  2ITK-SNAP92750      
  31000 Functional Connectomes Project75816      
  4DTI-TK64109      
  5WFU_PickAtlas23516      
  6TOADS-CRUISE Brain Segmentation Tools22934      
  7EEGLAB20810      
  8DSI Studio18700      
  9CONN : functional connectivity toolbox18649      
  10Multi-Modal MRI Reproducibility Resource16424      
  11JIST: Java Image Science Toolkit12487      
  12Functional Imaging BIRN11811      
  13The Neuro Bureau9566      
  14MINC - Medical Image NetCDF8822      
  15BrainNet Viewer8336      
  16PANDA: a pipeline tool for diffusion MRI7918      
  17Talairach Daemon7632      
  18MRtrix7393      
  19BrainMap Database7233      
  20GIFTI6961      
  21NeuroDebian6713      
  22BrainVisa Morphologist extensions6659      
  23Subject Order-Independent Group ICA6304      
  24Mango6281      
  25Automatic Registration Toolbox6019      
  26IBSR5840      
  273D Slicer5820      
  28BrainVISA5504      
  29The IIT Human Brain Atlas (v.3.1)5491      
  30fMRI-CPCA5244      
  31Diffusion Toolkit / TrackVis4904      
  32BrainMask Volume Processing Tool4885      
  33Generalized PPI Toolbox4545      
  343DSlicerLupusLesionModule4515      
  35BioImage Suite4393      
  36FSL4351      
  37LONI Pipeline Environment4283      
  38Artifact Detection Tools (ART)4076      
  39BrainVoyager QX4014      
  40XNAT Extras3926      
  41SRI24 Atlas: Normal Adult Brain Anatomy3816      
  42Hammer And WML Modules for 3D Slicer3655      
  43Neuroimaging Made Easy Blog3482      
  44FreeSurfer3454      
  45NYU CSC TestRetest3369      
  46Solar Eclipse Imaging Genetics tools3331      
  47BrainVoyager Brain Tutor3310      
  48Group ICA Toolbox (GIFT and EEGIFT)3279      
  49Human Imaging Database (HID)3106      
  50Computational Morphometry Toolkit (CMTK)3083      
  51Data Format Tools3005      
  52MITK Diffusion2940      
  53Maps4Mipav (Exploratory JIST) 2706      
  54HAMMER: Deformable Registration2683      
  55Center for Functional Neuroimaging Tech2650      
  56FBIRN Image Processing Scripts (FIPS)2515      
  57NIfTI2489      
  58ABC (Atlas Based Classification)2449      
  59ABSORB for groupwise registration2447      
  60Spatially Constrained Parcellation2445      
  61MATLAB Tutorial on Diffusion Tensor MRI2358      
  62GLIRT2313      
  63UNC 0-1-2 Infant Atlases2227      
  64SPM2134      
  65Optseq - fMRI Event Scheduler2109      
  66Task Independent Fluctuations Discussion2089      
  67BXH/XCEDE Tools2067      
  68BrainSuite2063      
  69MRI Defacer2044      
  70LONI Debabeler2033      
  71JIP fMRI Analysis Toolkit1979      
  72MIPAV1970      
  73SPHARM-PDM Toolbox1961      
  74TumorSim1887      
  75REX1829      
  76NeuroImaging Analysis Kit (NIAK)1813      
  77CANDI Neuroimaging Access Point1809      
  78MRI Studio1769      
  79Waxholm Space Atlas1725      
  80Pipeline system for Octave and Matlab1713      
  81FMRIpower1702      
  82ARCTIC1674      
  83XNAT1672      
  84Numerical Fibre Generator (NFG)1665      
  85Network-Based Statistic (NBS)1568      
  86DWI/DTI Quality Control Tool: DTIPrep1536      
  87Licensing1418      
  88PESTICA & SLOMOCO: physio and motion correction tools1343      
  89BrainSolution1309      
  90NIH Pediatric MRI Data Repository1299      
  91WFU_Pipeline1288      
  92Slicer3 Example Modules1266      
  933D Interactive Chemical Shift Imaging1265      
  94Gradient Non-linearity Unwarping Tool1245      
  95Brainscape1223      
  96GRETNA1220      
  97DicomBrowser1218      
  98xjView, a viewing tool for SPM1143      
  99Source Information Flow Toolbox1139      
  100BrainParser1133