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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  31000 Functional Connectomes Project97831      
  5CONN : functional connectivity toolbox40050      
  9TOADS-CRUISE Brain Segmentation Tools27357      
  10DSI Studio26564      
  12Multi-Modal MRI Reproducibility Resource23638      
  13IIT Human Brain Atlas (v.4.1)19039      
  14Functional Imaging BIRN15203      
  15JIST: Java Image Science Toolkit15129      
  16BrainNet Viewer14665      
  17PANDA: a pipeline tool for diffusion MRI13721      
  19The Neuro Bureau13092      
  20Generalized PPI Toolbox11316      
  22MINC - Medical Image NetCDF10595      
  23BrainVisa Morphologist extensions9862      
  26Solar Eclipse Imaging Genetics tools8987      
  283D Slicer8814      
  30Talairach Daemon8603      
  31BrainMap Database8587      
  32MITK Diffusion7949      
  34BioImage Suite7644      
  35Automatic Registration Toolbox7632      
  36Subject Order-Independent Group ICA7246      
  38Diffusion Toolkit / TrackVis6737      
  39Neuroimaging Made Easy Blog6589      
  40BrainMask Volume Processing Tool6178      
  41Artifact Detection Tools (ART)5983      
  42XNAT Extras5899      
  45NYU CSC TestRetest5375      
  46fNIRS Data Analysis Environment5265      
  47Data Format Tools5244      
  48Hammer And WML Modules for 3D Slicer5209      
  50Group ICA Toolbox (GIFT and EEGIFT)5163      
  51Spatially Constrained Parcellation4906      
  52LONI Pipeline Environment4784      
  53Computational Morphometry Toolkit (CMTK)4682      
  54SRI24 Atlas: Normal Adult Brain Anatomy4602      
  55NeuroImaging Analysis Kit (NIAK)4318      
  56BrainVoyager Brain Tutor4237      
  57Network-Based Statistic (NBS)4187      
  58Human Imaging Database (HID)4122      
  59UNC 0-1-2 Infant Atlases4094      
  60Center for Functional Neuroimaging Tech3749      
  61Source Information Flow Toolbox3499      
  63ABSORB for groupwise registration3396      
  64FBIRN Image Processing Scripts (FIPS)3372      
  66MATLAB Tutorial on Diffusion Tensor MRI3347      
  68HAMMER: Deformable Registration3222      
  70SPHARM-PDM Toolbox3039      
  71Maps4Mipav (Exploratory JIST) 3028      
  72MRI Defacer2999      
  73ABC (Atlas Based Classification)2999      
  74BXH/XCEDE Tools2907      
  75GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity2854      
  77Optseq - fMRI Event Scheduler2771      
  78Vaa3D and Vaa3D-Neuron2735      
  82Pipeline system for Octave and Matlab2655      
  83CANDI Neuroimaging Access Point2650      
  84Task Independent Fluctuations Discussion2632      
  85LONI Debabeler2629      
  86DWI/DTI Quality Control Tool: DTIPrep2596      
  872008 MICCAI MS Lesion Segmentation Challenge2591      
  88CBS High-Res Brain Processing Tools2458      
  89JIP fMRI Analysis Toolkit2390      
  90Waxholm Space Atlas2388      
  93MRI Studio2240      
  97PESTICA & SLOMOCO: physio and motion correction tools2185      
  99MARS (Multi-Atlas Robust Segmentation)2161      
  100Numerical Fibre Generator (NFG)2160