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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron409173      
  2ITK-SNAP115475      
  31000 Functional Connectomes Project83681      
  4DTI-TK66709      
  5EEGLAB30250      
  6FreeSurfer29599      
  7CONN : functional connectivity toolbox26588      
  8WFU_PickAtlas26063      
  9TOADS-CRUISE Brain Segmentation Tools25174      
  10DSI Studio22645      
  11Multi-Modal MRI Reproducibility Resource19429      
  12JIST: Java Image Science Toolkit13710      
  13Functional Imaging BIRN13411      
  14The Neuro Bureau10947      
  15BrainNet Viewer10787      
  16IIT Human Brain Atlas (v.4.0)10634      
  17PANDA: a pipeline tool for diffusion MRI10265      
  18MINC - Medical Image NetCDF9584      
  19IBSR8790      
  20BrainVisa Morphologist extensions8293      
  21MRtrix8158      
  22Talairach Daemon8131      
  23GIFTI8111      
  24NeuroDebian8063      
  25BrainMap Database7918      
  26Mango7660      
  27Generalized PPI Toolbox7538      
  283D Slicer7055      
  29Automatic Registration Toolbox6994      
  30Subject Order-Independent Group ICA6797      
  31BrainVISA6565      
  32fMRI-CPCA6030      
  33Diffusion Toolkit / TrackVis5684      
  34BrainMask Volume Processing Tool5539      
  35Solar Eclipse Imaging Genetics tools5436      
  36MITK Diffusion5055      
  37BioImage Suite4942      
  38Artifact Detection Tools (ART)4914      
  393DSlicerLupusLesionModule4879      
  40FSL4829      
  41XNAT Extras4798      
  42Neuroimaging Made Easy Blog4733      
  43LONI Pipeline Environment4545      
  44BrainVoyager QX4468      
  45Hammer And WML Modules for 3D Slicer4314      
  46Group ICA Toolbox (GIFT and EEGIFT)4246      
  47SRI24 Atlas: Normal Adult Brain Anatomy4169      
  48NYU CSC TestRetest4080      
  49Data Format Tools4074      
  50MRIcroGL4063      
  51Computational Morphometry Toolkit (CMTK)3716      
  52BrainVoyager Brain Tutor3688      
  53Human Imaging Database (HID)3555      
  54Spatially Constrained Parcellation3410      
  55Center for Functional Neuroimaging Tech3080      
  56HAMMER: Deformable Registration2975      
  57ABSORB for groupwise registration2972      
  58NeuroImaging Analysis Kit (NIAK)2944      
  59FBIRN Image Processing Scripts (FIPS)2927      
  60Maps4Mipav (Exploratory JIST) 2892      
  61UNC 0-1-2 Infant Atlases2868      
  62NIfTI2834      
  63Network-Based Statistic (NBS)2824      
  64MATLAB Tutorial on Diffusion Tensor MRI2805      
  65ABC (Atlas Based Classification)2698      
  66fNIRS Data Analysis Environment2567      
  67SPM2565      
  68GLIRT2495      
  69MRI Defacer2464      
  70SPHARM-PDM Toolbox2452      
  71TumorSim2422      
  72BrainSuite2397      
  73Optseq - fMRI Event Scheduler2396      
  74BXH/XCEDE Tools2385      
  75LONI Debabeler2364      
  76Task Independent Fluctuations Discussion2356      
  77Pipeline system for Octave and Matlab2246      
  78CANDI Neuroimaging Access Point2195      
  79JIP fMRI Analysis Toolkit2191      
  80REX2180      
  81Source Information Flow Toolbox2161      
  82MIPAV2125      
  83FMRIpower2103      
  84DWI/DTI Quality Control Tool: DTIPrep2017      
  85Waxholm Space Atlas2015      
  86GRETNA2005      
  87MRI Studio1959      
  88NiLearn1924      
  89XNAT1915      
  90Licensing1791      
  91Numerical Fibre Generator (NFG)1786      
  92ARCTIC1781      
  93PESTICA & SLOMOCO: physio and motion correction tools1751      
  94DicomBrowser1627      
  95BrainSolution1549      
  96iBEAT1507      
  97Vaa3D and Vaa3D-Neuron1490      
  98NIH Pediatric MRI Data Repository1489      
  992008 MICCAI MS Lesion Segmentation Challenge1488      
  100GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity1479