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FreeSurferWiki
Description: The central Wiki page for the FreeSurfer Community
Updated: Feb 26, 2014
Documentation ( 6 )+
PubMed Mentions ( 7121 )+
Technical Publications ( 23 )+
A genetic algorithm for the topology correction of cortical surfaces.
Description: Segonne, Florent, et al. A genetic algorithm for the topology correction of cortical surfaces. ''Inf Process Med Imaging''. 2005; '''19''': 393-405
Updated: Feb 26, 2014
A hybrid approach to the skull stripping problem in MRI.
Description: Segonne, F, et al. A hybrid approach to the skull stripping problem in MRI. ''Neuroimage''. 2004 Jul; '''22''' (3):1060-75
Updated: Feb 26, 2014
An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest.
Description: Desikan, Rahul S, et al. An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest. ''Neuroimage''. 2006 Jul 1; '''31''' (3):968-80
Updated: Feb 26, 2014
Atlas renormalization for improved brain MR image segmentation across scanner platforms.
Description: Han, Xiao, et al. Atlas renormalization for improved brain MR image segmentation across scanner platforms. ''IEEE Trans Med Imaging''. 2007 Apr; '''26''' (4):479-86
Updated: Feb 26, 2014
Automated manifold surgery: constructing geometrically accurate and topologically correct models of the human cerebral cortex.
Description: Fischl, B, et al. Automated manifold surgery: constructing geometrically accurate and topologically correct models of the human cerebral cortex. ''IEEE Trans Med Imaging''. 2001 Jan; '''20''' (1):70-80
Updated: Feb 26, 2014
Automated probabilistic reconstruction of white-matter pathways in health and disease using an atlas of the underlying anatomy.
Description: Yendiki, Anastasia, et al. Automated probabilistic reconstruction of white-matter pathways in health and disease using an atlas of the underlying anatomy. ''Front Neuroinform''. 2011; '''5''': 23
Updated: Feb 26, 2014
Automatically parcellating the human cerebral cortex.
Description: Fischl, Bruce, et al. Automatically parcellating the human cerebral cortex. ''Cereb Cortex''. 2004 Jan; '''14''' (1):11-22
Updated: Feb 26, 2014
Automatic parcellation of human cortical gyri and sulci using standard anatomical nomenclature.
Description: Destrieux, Christophe, et al. Automatic parcellation of human cortical gyri and sulci using standard anatomical nomenclature. ''Neuroimage''. 2010 Oct 15; '''53''' (1):1-15
Updated: Feb 26, 2014
Avoiding asymmetry-induced bias in longitudinal image processing.
Description: Reuter, Martin, et al. Avoiding asymmetry-induced bias in longitudinal image processing. ''Neuroimage''. 2011 Jul 1; '''57''' (1):19-21
Updated: Feb 26, 2014
Cortical folding patterns and predicting cytoarchitecture.
Description: Fischl, Bruce, et al. Cortical folding patterns and predicting cytoarchitecture. ''Cereb Cortex''. 2008 Aug; '''18''' (8):1973-80
Updated: Feb 26, 2014
Cortical surface-based analysis. I. Segmentation and surface reconstruction.
Description: Dale, A M, et al. Cortical surface-based analysis. I. Segmentation and surface reconstruction. ''Neuroimage''. 1999 Feb; '''9''' (2):179-94
Updated: Feb 26, 2014
Effects of registration regularization and atlas sharpness on segmentation accuracy.
Description: Yeo, B T Thomas, et al. Effects of registration regularization and atlas sharpness on segmentation accuracy. ''Med Image Anal''. 2008 Oct; '''12''' (5):603-15
Updated: Feb 26, 2014
Highly accurate inverse consistent registration: a robust approach.
Description: Reuter, Martin, et al. Highly accurate inverse consistent registration: a robust approach. ''Neuroimage''. 2010 Dec; '''53''' (4):1181-96
Updated: Feb 26, 2014
High-resolution intersubject averaging and a coordinate system for the cortical surface.
Description: Fischl, B, et al. High-resolution intersubject averaging and a coordinate system for the cortical surface. ''Hum Brain Mapp''. 1999; '''8''' (4):272-84
Updated: Feb 26, 2014
Improved Localizadon of Cortical Activity by Combining EEG and MEG with MRI Cortical Surface Reconstruction: A Linear Approach.
Description: Dale, A M, et al. Improved Localizadon of Cortical Activity by Combining EEG and MEG with MRI Cortical Surface Reconstruction: A Linear Approach. ''J Cogn Neurosci''. 1993 Spring; '''5''' (2):162-76
Updated: Feb 26, 2014
Learning task-optimal registration cost functions for localizing cytoarchitecture and function in the cerebral cortex.
Description: Yeo, B T Thomas, et al. Learning task-optimal registration cost functions for localizing cytoarchitecture and function in the cerebral cortex. ''IEEE Trans Med Imaging''. 2010 Jul; '''29''' (7):1424-41
Updated: Feb 26, 2014
Measuring the thickness of the human cerebral cortex from magnetic resonance images.
Description: Fischl, B, et al. Measuring the thickness of the human cerebral cortex from magnetic resonance images. ''Proc Natl Acad Sci U S A''. 2000 Sep 26; '''97''' (20):11050-5
Updated: Feb 26, 2014
Reliability of MRI-derived measurements of human cerebral cortical thickness: the effects of field strength, scanner upgrade and manufacturer.
Description: Han, Xiao, et al. Reliability of MRI-derived measurements of human cerebral cortical thickness: the effects of field strength, scanner upgrade and manufacturer. ''Neuroimage''. 2006 Aug 1; '''32''' (1):180-94
Updated: Feb 26, 2014
Sequence-independent segmentation of magnetic resonance images.
Description: Fischl, Bruce, et al. Sequence-independent segmentation of magnetic resonance images. ''Neuroimage''. 2004; '''23 Suppl 1''': S69-84
Updated: Feb 26, 2014
Spatiotemporal linear mixed effects modeling for the mass-univariate analysis of longitudinal neuroimage data.
Description: Bernal-Rusiel, Jorge L, et al. Spatiotemporal linear mixed effects modeling for the mass-univariate analysis of longitudinal neuroimage data. ''Neuroimage''. 2013 Nov 1; '''81''': 358-70
Updated: Feb 26, 2014
Spherical demons: fast diffeomorphic landmark-free surface registration.
Description: Yeo, B T Thomas, et al. Spherical demons: fast diffeomorphic landmark-free surface registration. ''IEEE Trans Med Imaging''. 2010 Mar; '''29''' (3):650-68
Updated: Feb 26, 2014
Statistical analysis of longitudinal neuroimage data with Linear Mixed Effects models.
Description: Bernal-Rusiel, Jorge L, et al. Statistical analysis of longitudinal neuroimage data with Linear Mixed Effects models. ''Neuroimage''. 2012 Oct 30; '''66C''': 249-260
Updated: Feb 26, 2014
Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain.
Description: Fischl, Bruce, et al. Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain. ''Neuron''. 2002 Jan 31; '''33''' (3):341-55
Updated: Feb 26, 2014