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  <title>NITRC Mindboggle: open source software for analyzing the shapes of brain structures from human MRI data Forum: open-discussion</title>
  <link>http://www.nitrc.org/forum/forum.php?forum_id=101</link>
  <description>General Discussion</description>
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   <title>Python?</title>
   <link>http://www.nitrc.org/forum/forum.php?thread_id=110&amp;forum_id=101</link>
   <description>I am in the process of registering Mindboggle (http://www.binarybottle.com/mindboggle.html) with NITRC, and am about to completely rewrite Mindboggle to have a more efficient, flexible and modular processing pipeline. I am strongly considering porting the codebase over to Python for the following reasons:&lt;br /&gt;
&lt;br /&gt;
1. free, open source (unlike Matlab)&lt;br /&gt;
2. easy to program, understand, and maintain&lt;br /&gt;
3. easy for Matlabbers (e.g., python's Matplotlib)&lt;br /&gt;
4. recent development of numpy (scipy.org)&lt;br /&gt;
5. widely used&lt;br /&gt;
&lt;br /&gt;
As evidence of #5, beyond the recent effort of NiPy (http://neuroimaging.scipy.org/) to create a &amp;quot;full-featured python program and development environment for analyzing functional imaging data,&amp;quot; and the extensive list of scientific programs on scipy.org's website, I'm finding that many software suites are now using Python as the scripting language that &amp;quot;glues&amp;quot; pieces of code together (e.g., ESRI's GIS software).&lt;br /&gt;
&lt;br /&gt;
I would be very interested to hear what people have to say about porting code over from Matlab to Python for use by the neuroimaging community.&lt;br /&gt;
&lt;br /&gt;
Thank you!&lt;br /&gt;
&lt;br /&gt;
Cheers,&lt;br /&gt;
@rno</description>
   <author>Arno Klein</author>
   <pubDate>Mon, 25 Jun 2007 20:00:40 GMT</pubDate>
   <guid>http://www.nitrc.org/forum/forum.php?thread_id=110&amp;forum_id=101</guid>
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   <title>Welcome to Open-Discussion</title>
   <link>http://www.nitrc.org/forum/forum.php?thread_id=105&amp;forum_id=101</link>
   <description>Welcome to Open-Discussion</description>
   <author>Christian Haselgrove</author>
   <pubDate>Mon, 25 Jun 2007 19:24:18 GMT</pubDate>
   <guid>http://www.nitrc.org/forum/forum.php?thread_id=105&amp;forum_id=101</guid>
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