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  <title>NITRC News Group Forum: physiologic-noise-pestica-tools-released-for-afni-users</title>
  <link>http://www.nitrc.org/forum/forum.php?forum_id=1477</link>
  <description>AFNI users rejoice. With this parallel version of PESTICA, you can now use PESTICA with standard AFNI tools (example shell scripts included).  Additionally, you can input NIFTI-formatted data (but only in NIFTI_PAIR hdr+img format, so if you have AFNI BRIK or NIFTI nii files, you'll need to 3dcopy &lt;dataset&gt;.nii &lt;dataset&gt;.hdr before use).</description>
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   <title>question for run_pestica_est.sh</title>
   <link>http://www.nitrc.org/forum/forum.php?thread_id=2589&amp;forum_id=1477</link>
   <description>Hi all,&lt;br /&gt;
I am running pestica on some data I have.  I ran the first script successfully.  but on the second script, I get:&lt;br /&gt;
&lt;br /&gt;
 Unzipping ____tmp_mask_global+orig.BRIK.gz...&lt;br /&gt;
??? Undefined function or method 'corr' for input arguments of type 'double'.&lt;br /&gt;
&lt;br /&gt;
Error in ==&amp;gt; apply_PESTICA2 at 105&lt;br /&gt;
    r_r(j)=corr(sparsed_resp,sparsed_m(:,j));&lt;br /&gt;
&lt;br /&gt;
I gather that the images are seen as double.  What kind of images does the script require?&lt;br /&gt;
Thanks,&lt;br /&gt;
--Matt</description>
   <author>Matthew Hoptman</author>
   <pubDate>Thu, 11 Aug 2011 16:45:29 GMT</pubDate>
   <guid>http://www.nitrc.org/forum/forum.php?thread_id=2589&amp;forum_id=1477</guid>
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