NITRC CCSeg - Corpus Callosum Segmentation Forum: open-discussion

RE: yuki 2.2 problem after install in Centos 8

Martin Styner — Fri, 10 Feb 2023 14:14:57 GMT

[color=#000000]thanks for the information! It's great to hear that this worked for you
[/color]
[i]Martin[/i]

[i]Originally posted by bondi:[/i][quote]Problem was that LAPACK documentation does not provide solution how to build shared libraries of LAPACK - just static libraries.
If someone have the same problem, I found this solution witch is working for me:
https://github.com/Reference-LAPACK/lapack/issues/611#issuecomment-1425799454

Regards![/quote]

RE: yuki 2.2 problem after install in Centos 8

bondi — Fri, 10 Feb 2023 13:24:31 GMT

Problem was that LAPACK documentation does not provide solution how to build shared libraries of LAPACK - just static libraries.
If someone have the same problem, I found this solution witch is working for me:
https://github.com/Reference-LAPACK/lapack/issues/611#issuecomment-1425799454

Regards!

RE: yuki 2.2 problem after install in Centos 8

Martin Styner — Thu, 09 Feb 2023 20:30:29 GMT

[color=#000000]Not sure that would work, as the compilation is from Centos 7. Best find a RHEL/Centos 8 package that contains these 2 libs and try to use these, or compile the lapack libraries on your system as shared libraries.On our system, we use the preinstalled lapack/blas libraries.[/color]

[color=#000000]Martin
[/color]

[i]Originally posted by bondi:[/i][quote]Hi,
After install Yuki 2.2 on Centos 8 Stream I was run comand: yuki -h . It's return an error: "error while loading shared libraries: liblapack.so.3: cannot open shared object file: No such file or directory". This is because I do not have installed lapack and blas packages in my system. It is problem to me because i work in cluster environment and in this case i should install those two packages on all nodes which is very absorbing and not recommended. Instead of this I tryied to install LAPACK as "environment module" (trying to compile it from sources) . Unfortunatelly lapack can only been installed as static library - yuki needs shared library. So can You attatch those two libraries (lapack and blas) into yuki binaries? Thanks![/quote]

yuki 2.2 problem after install in Centos 8

bondi — Thu, 09 Feb 2023 13:44:58 GMT

Hi,
After install Yuki 2.2 on Centos 8 Stream I was run comand: yuki -h . It's return an error: "error while loading shared libraries: liblapack.so.3: cannot open shared object file: No such file or directory". This is because I do not have installed lapack and blas packages in my system. It is problem to me because i work in cluster environment and in this case i should install those two packages on all nodes which is very absorbing and not recommended. Instead of this I tryied to install LAPACK as "environment module" (trying to compile it from sources) . Unfortunatelly lapack can only been installed as static library - yuki needs shared library. So can You attatch those two libraries (lapack and blas) into yuki binaries? Thanks!

Welcome to Open-Discussion

Christian Haselgrove — Fri, 25 Mar 2011 15:15:45 GMT

Welcome to Open-Discussion