<?xml version="1.0" encoding="UTF-8"?>
<?xml-stylesheet type="text/xsl" href="https://www.nitrc.org/themes/nitrc3.0/css/rss.xsl.php?feed=https://www.nitrc.org/export/rss20_forum.php?forum_id=4637" ?>
<?xml-stylesheet type="text/css" href="https://www.nitrc.org/themes/nitrc3.0/css/rss.css" ?>
<rss version="2.0"> <channel>
  <title>NITRC News Group Forum: the-3rd-hbm-hackathon-challenge--resources-mapped-to-mni-space</title>
  <link>http://www.nitrc.org/forum/forum.php?forum_id=4637</link>
  <description>&lt;p&gt;&lt;img src=&quot;http://www.bic.mni.mcgill.ca/uploads/ServicesAtlases/mni_icbm152_sym_09a_small.jpg&quot;&gt;&lt;/p&gt;

&lt;p&gt;MNI Mashup: Most innovative map or aggregation of information in the MNI 152 standard.&lt;/p&gt;

&lt;!-- more --&gt;


&lt;p&gt;This challenge challenge is to be addressed entirely during the meeting using resources made openly available to the brain mapping community.&lt;/p&gt;

&lt;p&gt;Example projects:&lt;/p&gt;

&lt;ul&gt;
&lt;li&gt;Aggregating standard MNI space 3D shape models of neuroanatomical structures&lt;/li&gt;
&lt;li&gt;&lt;p&gt;&amp;#8220;Dense brain information map&amp;#8221;. Given an (x,y,z,r) tell me everything you can about (x,y,z,r), especially including uncertainty of that information. Here are a few examples of information that could be returned:&lt;/p&gt;

&lt;ul&gt;
&lt;li&gt;gene expression (and the uncertainty would be high if imputing and low if exactly at a probe location)&lt;/li&gt;
&lt;li&gt;cognitive atlas terms and therefore publications and derivatives associated with that location ( a la neurosynth)&lt;/li&gt;
&lt;li&gt;variation in cortical thickness&lt;/li&gt;
&lt;li&gt;functional connectivity&lt;/li&gt;
&lt;li&gt;likelihood of major fiber bundles in that location&lt;/li&gt;
&lt;li&gt;registration inconsistency/uncertainty&lt;/li&gt;
&lt;li&gt;cytoarchitecture variation (neuron types, etc.,.)&lt;/li&gt;
&lt;li&gt;associated disorders&lt;/li&gt;
&lt;li&gt;data from other species&lt;/li&gt;
&lt;/ul&gt;
&lt;/li&gt;
&lt;/ul&gt;


&lt;p&gt;Judging criteria:&lt;/p&gt;

&lt;ul&gt;
&lt;li&gt;Scientific impact&lt;/li&gt;
&lt;li&gt;Commitment to open availability of the resulting resource&lt;/li&gt;
&lt;li&gt;Extensibility&lt;/li&gt;
&lt;li&gt;Inclusion of quantified uncertainty&lt;/li&gt;
&lt;/ul&gt;


&lt;p&gt;Rules&lt;/p&gt;

&lt;ul&gt;
&lt;li&gt;Participants must use publicly available data that is listed on the HBM Hackathon Blog. If a public dataset is not listed that you want to use, we would love to add it to the list, just contact us: hbm.hackathon@gmail.com&lt;/li&gt;
&lt;li&gt;Participants can use any computational resources available to them, but judging will take into account innovative use of cloud computing and how openly available the approach is (see Judging)&lt;/li&gt;
&lt;li&gt;At least one team leader/presenter must attend the meeting&lt;/li&gt;
&lt;li&gt;Off-site team members are allowed and encouraged, but will not be eligible for all resources made available to registered OHBM attendees (e.g., cloud computing credits)&lt;/li&gt;
&lt;/ul&gt;

</description>
  <language>en-us</language>
  <copyright>Copyright 2000-2026 NITRC OSI</copyright>
  <webMaster></webMaster>
  <lastBuildDate>Tue, 07 Apr 2026 19:50:33 GMT</lastBuildDate>
  <docs>http://blogs.law.harvard.edu/tech/rss</docs>
  <generator>NITRC RSS generator</generator>
 </channel>
</rss>
