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  <title>NITRC News Group Forum: the-effect-of-low-frequency-physiological-correction-on-the-reproducibility-and-specificity-of-resting-state-fmri-metrics--functional-connectivity--alff--and-reho.</title>
  <link>http://www.nitrc.org/forum/forum.php?forum_id=7929</link>
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	&lt;table border=&quot;0&quot; width=&quot;100%&quot;&gt;&lt;tr&gt;&lt;td align=&quot;left&quot;/&gt;&lt;td align=&quot;right&quot;&gt;&lt;a href=&quot;https://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&amp;amp;cmd=Link&amp;amp;LinkName=pubmed_pubmed&amp;amp;from_uid=29051724&quot;&gt;Related Articles&lt;/a&gt;&lt;/td&gt;&lt;/tr&gt;&lt;/table&gt;
        &lt;p&gt;&lt;b&gt;The Effect of Low-Frequency Physiological Correction on the Reproducibility and Specificity of Resting-State fMRI Metrics: Functional Connectivity, ALFF, and ReHo.&lt;/b&gt;&lt;/p&gt;          
        &lt;p&gt;Front Neurosci. 2017;11:546&lt;/p&gt;
        &lt;p&gt;Authors:  Golestani AM, Kwinta JB, Khatamian YB, Chen JJ&lt;/p&gt;
        &lt;p&gt;Abstract&lt;br/&gt;
        The resting-state fMRI (rs-fMRI) signal is affected by a variety of low-frequency physiological phenomena, including variations in cardiac-rate (CRV), respiratory-volume (RVT), and end-tidal CO2 (PETCO2). While these effects have become better understood in recent years, the impact that their correction has on the quality of rs-fMRI measurements has yet to be clarified. The objective of this paper is to investigate the effect of correcting for CRV, RVT and PETCO2 on the rs-fMRI measurements. Nine healthy subjects underwent a test-retest rs-fMRI acquisition using repetition times (TRs) of 2 s (long-TR) and 0.323 s (short-TR), and the data were processed using eight different physiological correction strategies. Subsequently, regional homogeneity (ReHo), amplitude of low-frequency fluctuation (ALFF), and resting-state connectivity of the motor and default-mode networks are calculated for each strategy. Reproducibility is calculated using intra-class correlation and the Dice Coefficient, while the accuracy of functional-connectivity measures is assessed through network separability, sensitivity and specificity. We found that: (1) the reproducibility of the rs-fMRI measures improved significantly after correction for PETCO2; (2) separability of functional networks increased after PETCO2 correction but was not affected by RVT and CRV correction; (3) the effect of physiological correction does not depend on the data sampling-rate; (4) the effect of physiological processes and correction strategies is network-specific. Our findings highlight limitations in our understanding of rs-fMRI quality measures, and underscore the importance of using multiple quality measures to determine the optimal physiological correction strategy.&lt;br/&gt;
        &lt;/p&gt;&lt;p&gt;PMID: 29051724 [PubMed]&lt;/p&gt;
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