Automatic Extra-Axial Cerebrospinal Fluid (Auto EACSF) News

MACOS version released

Juan Prieto — Fri, 22 Apr 2022 2:33:40 GMT

MACOS released. Compiled in MACOS Monterey 12.3
Skull stripping atlases added to the downloads section as well.

v1.7.7

Juan Prieto — Tue, 23 Jun 2020 8:37:30 GMT

- BUG: ABC tissue segmentation should only run with T1 if T2 is not provided
Create the ABC.xml file using only the T1 when the T2 is not provided. It will not run and crash the pipeline.

Releaset 1.7.6

Juan Prieto — Mon, 22 Jun 2020 7:52:44 GMT

New release with BUG fixes.

- BUG: The skull stripping step will create a directory with the stripped images regardless. If the user provides a mask, it uses this mask to skull strip the images and writes them in this directory.
- BUG: The tissue segmentation step was using the 'input' atlas directory instead of the registered one.

Version 1.7.5 released

Juan Prieto — Fri, 19 Jun 2020 5:17:49 GMT

- Bug fix when the user provides a brainmask.
- Bug fix to find the executables automatically in the application directory and PATH environment variable.
- Fixes bug in script generation for SkullStripping

Release 1.7.5

Juan Prieto — Tue, 16 Jun 2020 9:46:13 GMT

Bug fix when user provides a brainmask.
Bug fix to find the executables automatically in the application directory and PATH environment variable.

new examples in download

Martin Styner — Tue, 01 Oct 2019 12:51:18 GMT

Examples for a 1 year old and 6 month old subjects can be found in the download section.
1-year old example runs full pipeline, 6 month old example is pre-registered

Version 1.4.1., now also for RHL/CentOS 6

Martin Styner — Tue, 13 Aug 2019 12:34:15 GMT

This is a compilation of the 1.4.1 release for RHL/CentOS 6 as folks had problems getting the RHL 7 version to work on their systems.

new version 1.4.1

Martin Styner — Mon, 08 Jul 2019 6:35:47 GMT

New version 1.4.1 is released with bug fixes (still more to do).