
*****************************************************
The pipeline PIPE is now being processed.
Started on 22-Jan-2017 18:54:21
user: root, host: localhost.localdomain, system: unix
*****************************************************
22-Jan-2017 18:54:21 Split_WMLabel                   submitted (1 run / 0 fail / 0 done / 62 left)
22-Jan-2017 18:54:21 Split_WMProbtract               submitted (2 run / 0 fail / 0 done / 61 left)
22-Jan-2017 18:55:02 Split_WMProbtract               completed (1 run / 0 fail / 1 done / 61 left)
22-Jan-2017 18:55:02 dcm2nii_dwi_00001               submitted (2 run / 0 fail / 1 done / 60 left)
22-Jan-2017 18:55:12 Split_WMLabel                   completed (1 run / 0 fail / 2 done / 60 left)
22-Jan-2017 18:55:12 CopyT1_00001                    submitted (2 run / 0 fail / 2 done / 59 left)
22-Jan-2017 18:55:22 dcm2nii_dwi_00001               failed    (1 run / 1 fail / 2 done / 59 left)
22-Jan-2017 18:55:32 CopyT1_00001                    completed (0 run / 1 fail / 3 done / 59 left)
22-Jan-2017 18:55:32 BetT1_00001                     submitted (1 run / 1 fail / 3 done / 58 left)
22-Jan-2017 18:56:02 BetT1_00001                     completed (0 run / 1 fail / 4 done / 58 left)
22-Jan-2017 18:56:02 T1Cropped_00001                 submitted (1 run / 1 fail / 4 done / 57 left)
22-Jan-2017 18:56:23 T1Cropped_00001                 completed (0 run / 1 fail / 5 done / 57 left)
22-Jan-2017 18:56:23 T1Resample_00001                submitted (1 run / 1 fail / 5 done / 56 left)
22-Jan-2017 18:56:43 T1Resample_00001                completed (0 run / 1 fail / 6 done / 56 left)
22-Jan-2017 18:56:43 T1toMNI152_00001                submitted (1 run / 1 fail / 6 done / 55 left)
........
22-Jan-2017 19:06:57 T1toMNI152_00001                completed (0 run / 1 fail / 7 done / 55 left)
22-Jan-2017 19:06:57 Invwarp_00001                   submitted (1 run / 1 fail / 7 done / 54 left)
22-Jan-2017 19:07:27 Invwarp_00001                   completed (0 run / 1 fail / 8 done / 54 left)

*********************************************
The processing of the pipeline is terminated.
See report below for job completion status.
22-Jan-2017 19:07:27
*********************************************
The execution of the following job has failed :

    dcm2nii_dwi_00001 ; 

More infos can be found in the individual log files. Use the following command to display these logs :

    psom_pipeline_visu('/run/media/root/105C78D95C78BB54/PANDAresult/logs/','log',JOB_NAME)

The following jobs have not been processed due to a dependence on a failed job or the interruption of the pipeline manager :

    DataParameters_00001 ; OrientationPatch_00001 ; extractB0_00001 ; BET_1_00001 ; Split_Crop_00001 ; EDDYCURRENT_00001 ; average_00001 ; BET_2_00001 ; merge_00001 ; LDH_00001 ; dtifit_00001 ; BeforeNormalize_FA_00001 ; BeforeNormalize_MD_00001 ; BeforeNormalize_L1_00001 ; BeforeNormalize_L23m_00001 ; BeforeNormalize_LDHs_00001 ; BeforeNormalize_LDHk_00001 ; FAnormalize_00001 ; applywarp_FA_1mm_00001 ; applywarp_MD_1mm_00001 ; applywarp_L1_1mm_00001 ; applywarp_L23m_1mm_00001 ; applywarp_LDHs_1mm_00001 ; applywarp_LDHk_1mm_00001 ; applywarp_FA_2mm_00001 ; applywarp_MD_2mm_00001 ; applywarp_L1_2mm_00001 ; applywarp_L23m_2mm_00001 ; applywarp_LDHs_2mm_00001 ; applywarp_LDHk_2mm_00001 ; smoothNII_FA_2mm_00001 ; smoothNII_MD_2mm_00001 ; smoothNII_L1_2mm_00001 ; smoothNII_L23m_2mm_00001 ; smoothNII_LDHs_2mm_00001 ; smoothNII_LDHk_2mm_00001 ; atlas_FA_1mm_00001 ; atlas_MD_1mm_00001 ; atlas_L1_1mm_00001 ; atlas_L23m_1mm_00001 ; atlas_LDHs_1mm_00001 ; atlas_LDHk_1mm_00001 ; delete_tmp_file_00001 ; DeterministicTracking_00001 ; FAtoT1_00001 ; IndividualParcellated_00001 ; DeterministicNetwork_00001 ; ExportParametersToExcel ; ExportAtlasResults_FA_ToExcel ; ExportAtlasResults_MD_ToExcel ; ExportAtlasResults_L1_ToExcel ; ExportAtlasResults_L23m_ToExcel ; ExportAtlasResults_LDHs_ToExcel ; ExportAtlasResults_LDHk_ToExcel ; 

All jobs have been processed, but some jobs have failed.
You may want to restart the pipeline latter if you managed to fix the problems.
