Type: Error
Time: Mon Apr 12 17:21:25 2010
Description: ERROR: In /Users/hayes/Slicer-3-4/Slicer3/Modules/CommandLineModule/vtkCommandLineModuleLogic.cxx, line 1436
vtkCommandLineModuleLogic (0x200b3c90): Predict Lesions completed with errors




Type: Error
Time: Mon Apr 12 17:21:25 2010
Description: ERROR: In /Users/hayes/Slicer-3-4/Slicer3/Modules/CommandLineModule/vtkCommandLineModuleLogic.cxx, line 1411
vtkCommandLineModuleLogic (0x200b3c90): Predict Lesions standard error:

PredictLesions(13865,0xa01ed720) malloc: *** mmap(size=67108864) failed (error code=12)
*** error: can't allocate region
*** set a breakpoint in malloc_error_break to debug
/Data/home/erik/Slicer3erik/11541/LesionSegmentationApplications/PredictLesions: exception caught !




Type: Information
Time: Mon Apr 12 17:21:24 2010
Description: Predict Lesions standard output:

<filter-end>
<filter-time>0.458068</filter-time>
</filter-end><filter-end>
<filter-time>0.243665</filter-time>
</filter-end><filter-end>
<filter-time>0.243672</filter-time>
</filter-end><filter-end>
<filter-time>0.243673</filter-time>
</filter-end><filter-end>
<filter-time>0.243673</filter-time>
</filter-end><filter-end>
<filter-time>0.243674</filter-time>
</filter-end><filter-end>
<filter-time>0.449963</filter-time>
</filter-end><filter-end>
<filter-time>0.441693</filter-time>
</filter-end><filter-end>
<filter-time>1.24823</filter-time>
</filter-end><filter-end>
<filter-time>188.161</filter-time>
</filter-end><filter-end>
<filter-time>0.105724</filter-time>
</filter-end><filter-end>
<filter-time>0.0996451</filter-time>
</filter-end><filter-end>
<filter-time>131.61</filter-time>
</filter-end><filter-end>
<filter-time>0.099721</filter-time>
</filter-end><filter-end>
<filter-time>131.32</filter-time>
</filter-end><filter-end>
<filter-time>0.0984259</filter-time>
</filter-end><filter-end>
<filter-time>131.697</filter-time>
</filter-end><filter-end>
<filter-time>2.54472</filter-time>
</filter-end><filter-end>
<filter-time>9.15131</filter-time>
</filter-end><filter-end>
<filter-time>27.5629</filter-time>
</filter-end><filter-end>
<filter-time>1.8331</filter-time>
</filter-end><filter-end>
<filter-time>9.33818</filter-time>
</filter-end><filter-end>
<filter-time>27.4695</filter-time>
</filter-end><filter-end>
<filter-time>1.7952</filter-time>
</filter-end><filter-end>
<filter-time>8.84719</filter-time>
</filter-end><filter-end>
<filter-time>27.5241</filter-time>
</filter-end><filter-end>
<filter-time>10.8402</filter-time>
</filter-end><filter-end>
<filter-time>26.2525</filter-time>
</filter-end><filter-end>
<filter-time>74.6201</filter-time>
</filter-end><filter-end>
<filter-time>6.80694</filter-time>
</filter-end><filter-end>
<filter-time>26.3971</filter-time>
</filter-end><filter-end>
<filter-time>74.502</filter-time>
</filter-end><filter-end>
<filter-time>6.90394</filter-time>
</filter-end><filter-end>
<filter-time>26.5482</filter-time>
</filter-end><filter-end>
<filter-time>74.1151</filter-time>
</filter-end><filter-end>
<filter-time>2.23639</filter-time>
</filter-end><filter-end>
<filter-time>7.14724</filter-time>
</filter-end><filter-end>
<filter-time>18.1108</filter-time>
</filter-end><filter-end>
<filter-time>1.98855</filter-time>
</filter-end><filter-end>
<filter-time>7.15982</filter-time>
</filter-end><filter-end>
<filter-time>18.0655</filter-time>
</filter-end><filter-end>
<filter-time>1.97017</filter-time>
</filter-end><filter-end>
<filter-time>7.14791</filter-time>
</filter-end>

Type: Information
Time: Mon Apr 12 17:03:07 2010
Description: Predict Lesions command line: 

/Data/home/erik/Slicer3erik/11541/LesionSegmentationApplications/PredictLesions --inputT1Volume /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeJ.nrrd --inputT2Volume /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeBA.nrrd --inputFLAIRVolume /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeBB.nrrd --inputMaskVolume /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeF.nrrd --inputPercentThreshold 12 --inputModelFile lesionSegmentation.model --inputSVMModelFile svm.model --outputLesionMask /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeBC.nrrd --outputLesionProb /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeBD.nrrd 


Type: Information
Time: Mon Apr 12 17:03:04 2010
Description: CommandLineModule

Type: Information
Time: Mon Apr 12 17:03:04 2010
Description: Found CommandLine Module

Type: Information
Time: Mon Apr 12 16:54:20 2010
Description: Joint Intensity Standardization completed without errors


Type: Information
Time: Mon Apr 12 16:54:16 2010
Description: Joint Intensity Standardization standard output:

<filter-end>
<filter-time>0.264366</filter-time>
</filter-end><filter-end>
<filter-time>0.261672</filter-time>
</filter-end><filter-end>
<filter-time>0.414419</filter-time>
</filter-end><filter-end>
<filter-time>0.40323</filter-time>
</filter-end><filter-end>
<filter-time>0.715212</filter-time>
</filter-end><filter-end>
<filter-time>0.197286</filter-time>
</filter-end><filter-end>
<filter-time>0.195762</filter-time>
</filter-end><filter-end>
<filter-time>0.190296</filter-time>
</filter-end><filter-end>
<filter-time>2.69504</filter-time>
</filter-end><filter-end>
<filter-time>3.27423</filter-time>
</filter-end><filter-end>
<filter-time>3.09492</filter-time>
</filter-end><filter-end>
<filter-time>5.35325</filter-time>
</filter-end><filter-end>
<filter-time>3.11569</filter-time>
</filter-end><filter-end>
<filter-time>5.30309</filter-time>
</filter-end><filter-end>
<filter-time>3.06955</filter-time>
</filter-end><filter-end>
<filter-time>5.16023</filter-time>
</filter-end><filter-end>
<filter-time>3.07477</filter-time>
</filter-end>

Type: Information
Time: Mon Apr 12 16:53:33 2010
Description: Joint Intensity Standardization command line: 

/Data/home/erik/Slicer3erik/11541/LesionSegmentationApplications/IntensityStandardize --inputT1Mov /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeH.nrrd --inputT2Mov /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeI.nrrd --inputFLAIRMov /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeG.nrrd --inputMovMask /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeF.nrrd --inputT1Ref /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeD.nrrd --inputT2Ref /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeE.nrrd --inputFLAIRRef /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeC.nrrd --inputRefMask /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeB.nrrd --outputT1Mov /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeJ.nrrd --outputT2 /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeBA.nrrd --outputFlair /Data/home/erik/Slicer3erik/BCDAH_vtkMRMLScalarVolumeNodeBB.nrrd 


Type: Information
Time: Mon Apr 12 16:53:26 2010
Description: CommandLineModule

Type: Information
Time: Mon Apr 12 16:53:26 2010
Description: Found CommandLine Module