refbrain
NRRD0004
# Complete NRRD file format specification at:
# http://teem.sourceforge.net/nrrd/format.html
type: unsigned char
dimension: 3
space: left-posterior-superior
sizes: 512 512 71
space directions: (0.20863246012303474,0,0) (0,0.20863246012303474,0) (0,0,0.99992849462365607)
kinds: domain domain domain
encoding: gzip
space origin: (0,0,0)

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(Fiji Is Just) ImageJ 2.0.0-rc-68/1.52e; Java 1.8.0_172 [64-bit]; Linux 3.10.0-862.3.2.el7.x86_64; 479MB of 618732MB (<1%)
 
Title: OrcoA11_01.nrrd
Width:  106.8198 microns (512)
Height:  106.8198 microns (512)
Depth:  70.9949 microns (71)
Size:  18MB
Resolution:  4.7931 pixels per micron
Voxel size: 0.2086x0.2086x0.9999 micron^3
ID: -2
Bits per pixel: 8 (grayscale LUT)
Display range: 0-255
Image: 1/71
No threshold
ScaleToFit: false
Uncalibrated
Path: /usr/people/zhileiz/Analysis/CalciumImaging/AnalysisPipeline/Registration/CMTK/CMTK_confocal/refbrain/OrcoA11_01.nrrd
Screen location: 693,130 (2048x1130)
Coordinate origin:  0,0,0
No overlay
No selection


float image
NRRD0004
# Created by Nrrd_Writer at Wed Aug 08 23:00:37 EDT 2018
type: uint8
encoding: raw
endian: big
dimension: 3
sizes: 512 512 71
space dimension: 3
space directions: (0.20863246012303474,0,0) (0,0.20863246012303474,0) (0,0,0.9999284946236561)
space units: "microns" "microns" "microns"

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(Fiji Is Just) ImageJ 2.0.0-rc-68/1.52e; Java 1.8.0_172 [64-bit]; Linux 3.10.0-862.3.2.el7.x86_64; 516MB of 618732MB (<1%)
 
Title: OrcoAfake_01.nrrd
Width:  106.8198 microns (512)
Height:  106.8198 microns (512)
Depth:  70.9949 microns (71)
Size:  18MB
Resolution:  4.7931 pixels per microns
Voxel size: 0.2086x0.2086x0.9999 microns^3
ID: -5
Bits per pixel: 8 (grayscale LUT)
Display range: 0-255
Image: 1/71
No threshold
ScaleToFit: false
Uncalibrated
Path: /usr/people/zhileiz/Analysis/CalciumImaging/AnalysisPipeline/Registration/CMTK/CMTK_confocal/images/OrcoAfake_01.nrrd
Screen location: 716,113 (2048x1130)
Coordinate origin:  0,0,0
No overlay
No selection



reformatted image
NRRD0004
# Complete NRRD file format specification at:
# http://teem.sourceforge.net/nrrd/format.html
type: unsigned char
dimension: 3
space: left-posterior-superior
sizes: 512 512 71
space directions: (0.20863246012303474,-0,0) (-0,0.20863246012303474,0) (-0,-0,0.99992849462365607)
kinds: domain domain domain
labels: "x" "y" "z"
encoding: gzip
space origin: (-0,-0,0)

------------------------------------------------------
(Fiji Is Just) ImageJ 2.0.0-rc-68/1.52e; Java 1.8.0_172 [64-bit]; Linux 3.10.0-862.3.2.el7.x86_64; 547MB of 618732MB (<1%)
 
Title: temp.nrrd
Width:  106.8198 microns (512)
Height:  106.8198 microns (512)
Depth:  70.9949 microns (71)
Size:  18MB
Resolution:  4.7931 pixels per micron
Voxel size: 0.2086x0.2086x0.9999 micron^3
ID: -8
Bits per pixel: 8 (grayscale LUT)
Display range: 0-255
Image: 1/71
No threshold
ScaleToFit: false
Uncalibrated
Path: /usr/people/zhileiz/Analysis/CalciumImaging/AnalysisPipeline/Registration/CMTK/CMTK_confocal/temp.nrrd
Screen location: 728,129 (2048x1130)
Coordinate origin:  0,0,0
No overlay
No selection