================================= * DWI QC Report ( DTIPrep 1.2.8 ) * ================================= DWI File: /file.nrrd xml File: Check Time: Wed Oct 31 13:02:03 2018 Image_information_checkingImage_size_check OK Image_information_checkingImage_origin_check OK Image_information_checkingImage_spacing_check OK Image_information_checkingImage_space_check OK ================================ Diffusion Information checking ================================ DWMRI_bValue Check: OK Diffusion gradient Check: OK ===================== SliceWiseCheck ... ================================ Slice-wise checking ================================ Parameters: CheckTimes: 0 HeadSkipRatio: 0.1 TailSkipRatio: 0.1 BaselineStdevTimes: 3 GradientStdevTimes: 3.5 QuadFit: 1 ====== Slice-wise Check Artifacts: Region Gradient# Slice# Correlation ===================== InterlaceWiseCheck ... ================================ Interlace-wise checking ================================ Parameters: CorrelationThresholdBaseline: 0.849839 CorrelationThresholdGradient: 0.883453 CorrelationStdevTimesBaseline: 2.5 CorrelationStdevTimesGradient: 3 TranslationThreshold: 1.31773 RotationThreshold: 0.5 ====== Interlace-wise Check Artifacts: Gradient#: AngleX AngleY AngleZ TranslationX TranslationY TranslationZ Metric(MI) Correlation ===================== BaselineAverage ... ================================ Baseline averaging ================================ Average Method: [DWIBaselineAverager::BaselineOptimized]--Averaging Optimized based on baseline images Stop threshold: 0.02 ====== Output Diffusion Gradient direction information: # DirVector 0 [ 0x0p+0, 0x0p+0, 0x0p+0 ] 1 [ -0x1p+0, 0x0p+0, 0x0p+0 ] 2 [ -0x1.f9db22d0e5604p-2, 0x1.bced916872b02p-1, 0x0p+0 ] 3 [ 0x1.eb851eb851eb8p-4, 0x1.483126e978d5p-1, 0x1.84189374bc6a8p-1 ] 4 [ -0x1.d6872b020c49cp-1, -0x1.52f1a9fbe76c9p-2, -0x1.b645a1cac0831p-3 ] 5 [ 0x1.cac083126e979p-4, -0x1.43126e978d4fep-1, 0x1.89374bc6a7efap-1 ] 6 [ 0x1.d3f7ced916873p-1, -0x1.e353f7ced9168p-3, 0x1.50e5604189375p-2 ] 7 [ -0x1.5cac083126e98p-1, 0x1.3645a1cac0831p-2, 0x1.55810624dd2f2p-1 ] 8 [ -0x1.126e978d4fdf4p-4, 0x1.fef9db22d0e56p-1, -0x1.a9fbe76c8b439p-7 ] 9 [ -0x1.d604189374bc7p-1, 0x1.395810624dd2fp-3, 0x1.77ced916872bp-2 ] 10 [ -0x1.c5a1cac083127p-2, -0x1.c7ae147ae147bp-1, 0x1.a5e353f7ced91p-4 ] 11 [ -0x1.ba5e353f7ced9p-3, -0x1.da9fbe76c8b44p-1, -0x1.3a5e353f7ced9p-2 ] 12 [ -0x1.eb851eb851eb8p-2, -0x1.578d4fdf3b646p-1, -0x1.2147ae147ae14p-1 ] 13 [ 0x1.199999999999ap-1, -0x1.e978d4fdf3b64p-2, 0x1.5eb851eb851ecp-1 ] 14 [ 0x1.66e978d4fdf3bp-1, 0x1.62d0e56041893p-1, 0x1.5e353f7ced917p-3 ] 15 [ 0x1.b74bc6a7ef9dbp-2, -0x1.cac083126e979p-8, -0x1.ce5604189374cp-1 ] 16 [ 0x1.65e353f7ced91p-1, -0x1.47ae147ae147bp-1, 0x1.47ae147ae147bp-2 ] 17 [ -0x1.73b645a1cac08p-1, 0x1.74bc6a7ef9db2p-4, -0x1.5d2f1a9fbe76dp-1 ] 18 [ -0x1.8f5c28f5c28f6p-2, -0x1.fdf3b645a1cacp-3, -0x1.c624dd2f1a9fcp-1 ] 19 [ 0x1.604189374bc6ap-3, -0x1.c3126e978d4fep-1, -0x1.c28f5c28f5c29p-2 ] 20 [ 0x1.3851eb851eb85p-1, 0x1.483126e978d5p-1, -0x1.de353f7ced917p-2 ] 21 [ -0x1.32b020c49ba5ep-1, 0x1.60c49ba5e353fp-1, 0x1.a2d0e56041893p-2 ] 22 [ 0x1.74bc6a7ef9db2p-1, 0x1.c6a7ef9db22d1p-3, -0x1.4c49ba5e353f8p-1 ] 23 [ -0x1.c4189374bc6a8p-1, -0x1.978d4fdf3b646p-2, 0x1.fdf3b645a1cacp-3 ] 24 [ -0x1.47ae147ae147bp-2, 0x1.189374bc6a7fp-1, 0x1.8b4395810624ep-1 ] 25 [ 0x1.6872b020c49bap-5, -0x1.126e978d4fdf4p-2, -0x1.ec8b439581062p-1 ] 26 [ -0x1.83126e978d4fep-3, -0x1.c10624dd2f1aap-1, 0x1.c5a1cac083127p-2 ] 27 [ -0x1.76c8b43958106p-1, -0x1.54fdf3b645a1dp-2, -0x1.3020c49ba5e35p-1 ] 28 [ -0x1.3c6a7ef9db22dp-2, -0x1.199999999999ap-1, 0x1.8d4fdf3b645a2p-1 ] 29 [ -0x1.24dd2f1a9fbe7p-2, 0x1.b74bc6a7ef9dbp-1, -0x1.b53f7ced91687p-2 ] 30 [ -0x1.b7ced916872bp-1, 0x1.020c49ba5e354p-1, 0x1.6872b020c49bap-4 ] 31 [ 0x1.b645a1cac0831p-4, 0x1.b851eb851eb85p-3, -0x1.f126e978d4fdfp-1 ] 32 [ 0x1.3126e978d4fdfp-2, -0x1.6c8b439581062p-3, 0x1.e04189374bc6ap-1 ] ===================== EddyCurrentHeadMotionCorrectIowa ... Transforms: 0 - Parameters: [0.9997120150525562, 0.00006717995630968968, -0.00008320493056741207, 0.0000032510907158494487, 0.9999963559249588, 0.000021600366197087753, 0.00016778276501145826, 0.000042722870552254316, 1.0000742464777104, 0.001653902025870765, -0.0016886532370643825, 0.0006036213206466796] 0 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 1 - Parameters: [0.9946661824277021, -0.0007093866334204523, 0.00032736937803803224, -0.008642166964147026, 0.9973214381704324, -0.0010033241707507385, -0.003957170009196093, -0.0004690457890112681, 0.9891514596439395, -0.054955240090991224, -0.06771459290706282, -0.2660420870461269] 1 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 2 - Parameters: [0.9942030410384367, 0.000021640424322895257, 0.003975665354087821, -0.004384636971244544, 0.9926702263941165, -0.0044180120253782176, -0.0010062561354803737, 0.0008945234201281019, 0.9853784314090581, 0.004184874039016224, 0.26748802906074814, -0.25390373677995076] 2 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 3 - Parameters: [0.9927127155962426, -0.0007678842721599316, 0.0021377110211443467, -0.0003770110175797664, 0.9915780540765975, -0.012057266982761114, -0.0006333202054640965, -0.00024235647610264464, 0.9826941537688161, 0.09756542638228832, -0.07831972375774209, -0.1722322441388597] 3 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 4 - Parameters: [0.9955473171398482, -0.0006149596998294572, 0.0032645231817482762, -0.007362456818771747, 0.9967578690303942, -0.004488142614471284, 0.0022498829088644415, 0.004159588235487935, 0.9864675818250761, -0.021286823038889856, -0.18348017329087613, -0.14546275929949398] 4 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 5 - Parameters: [0.9933453819797852, 0.001086622357950187, 0.0019959406920174987, -0.0010269478142783607, 1.0004169926958215, -0.010781095294087868, 0.0007094896676801741, 0.0004011629806963425, 0.984153467317044, -0.06593717067686171, -0.09477320849000026, -0.02825890587951888] 5 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 6 - Parameters: [0.9942815540659028, 0.002498813208169644, 0.0036128092684454666, -0.0005656369873701305, 0.9977660228198644, -0.002462866230533168, 0.0013514003257730316, 0.003312659801952044, 0.9868504315452519, -0.03352803663599106, -0.2662807202153191, -0.21938306303663216] 6 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 7 - Parameters: [0.9941875308276764, 0.0034492804816625405, -0.00035415256801618025, -0.01017614246948954, 0.9954729011654437, -0.010621999336836739, -0.0024485181533311063, 0.0008032661450382636, 0.9848275955206096, -0.07101289359788537, -0.2504272175096597, -0.08116009510209687] 7 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 8 - Parameters: [0.9940680232962852, 0.002515377402706297, 0.003253283965123818, -0.004759653891973015, 0.9918969543957008, -0.0045035369096859765, -0.0015003099586342525, 0.0025903684834345415, 0.9839518946944604, -0.0778318095458433, 0.10466664825389549, -0.25287954963558984] 8 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 9 - Parameters: [0.9948295279825564, 0.0017379801995347807, 0.0005388894135622451, -0.011754914125034023, 0.9952662716610751, -0.0089303274024285, -0.001924437568135562, 0.0021650474376142216, 0.9856388092344939, -0.13024412773525135, -0.23701302879413552, -0.1442965904074644] 9 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 10 - Parameters: [0.9945949627901369, 0.0010307456877364843, 0.0031564006839776416, -0.005795917731976807, 0.99822193563426, -0.006513711334977008, -0.00042234013174974273, 0.0030184379923014824, 0.9863256680576177, -0.10174695635189483, -0.14238389726382286, -0.06543127866786295] 10 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 11 - Parameters: [0.994410208121422, 0.004645019561967008, 0.005474164319595227, -0.008540039592106726, 0.9980780846035114, -0.003967684333685148, -0.0009501475281444633, 0.0038792429149146837, 0.9837482154775876, -0.08041244692664883, -0.07773875266202641, -0.223855760576209] 11 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 12 - Parameters: [0.9936068506918807, 0.00328308859743676, 0.0019980020184326187, -0.007897299462145421, 0.9972350980131697, -0.0053126925725478875, 0.0027360599331127727, 0.0004857112683494386, 0.9827056898003074, -0.08395314145475623, -0.1285313253342957, -0.08467593866774417] 12 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 13 - Parameters: [0.993950093424167, 0.006572685703118714, 0.0039023627600937526, -0.003242787609117499, 0.9975088387750763, -0.003066633794060398, 0.0006812418141612344, 0.004222240487236921, 0.9850465180044405, 0.003874957917894154, -0.28129431003136046, -0.14444748755824235] 13 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 14 - Parameters: [0.9940446566589441, 0.005590409106355285, 0.0013656998448081407, -0.0027095072170421936, 0.9917097660602173, -0.007743865008060752, 0.0014068790992168793, 0.003627764440896122, 0.9838245728666496, -0.032457469861622346, -0.23050319960595653, -0.1960039689620007] 14 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 15 - Parameters: [0.9957912894715908, 0.005498222372171366, 0.000330397940874422, -0.0003733501766066531, 0.9949585472372802, -0.0032423070868555304, -0.0002409061337949525, 0.00340157693633861, 0.9862154538640955, -0.11705192214506666, -0.14705588662357938, -0.06764184891511671] 15 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 16 - Parameters: [0.9934538015349572, 0.007007085524550979, -0.003061487505995831, -0.0014639675786969366, 0.9959514199560019, -0.004206150997922926, 0.0035244192512140448, 0.0010740393048547276, 0.9853073124795013, -0.013444658800239689, -0.20237833855656273, -0.00999535067398602] 16 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 17 - Parameters: [0.9955864652018094, 0.004344753013182277, 0.005638955702590278, -0.01186654024914727, 0.9935877884058101, 0.0005352430332232413, 0.0014275094678441417, 0.002350146469925273, 0.9859432563619317, -0.07034331127767982, -0.06924384601343359, -0.11792799804502019] 17 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 18 - Parameters: [0.9930563504970177, 0.00296572017586896, 0.003838226824166428, -0.009001485507866044, 0.9977223535203279, 0.0014328555152587621, 0.000678092635423365, 0.0008110964271810373, 0.9852258495925943, -0.05309729431731812, -0.09579752297928791, -0.06754378777893777] 18 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 19 - Parameters: [0.9943523275285321, 0.006759252874390753, -0.0011312808778198792, -0.003969743447601515, 0.9989276711238099, -0.004995658397140999, 0.0025889405577605895, 0.0011456128402145607, 0.9844954025886398, -0.166876091873986, -0.49731348441186213, -0.060716356579511944] 19 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 20 - Parameters: [0.9939088861417387, 0.008515380201935882, -0.0025875099997995413, -0.0029783980613001695, 0.9929834110179743, -0.00196527893489968, 0.0025315453642625555, 0.0023822758936505217, 0.9860135519123336, -0.17431952297317688, -0.08625133722701582, -0.08298311112124507] 20 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 21 - Parameters: [0.9948559234913604, 0.007420458781029941, -0.000011243901148734624, -0.010555793146341405, 0.9913755585445588, -0.01013786260361496, 0.0003477050604568609, 0.0020286218482253194, 0.983610480484092, -0.20759930434937177, -0.238158194662294, -0.13971895206642895] 21 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 22 - Parameters: [0.9956293002935599, 0.009302030907048287, -0.003653725067895802, -0.006005504653299458, 0.99357222260751, -0.002497964065971906, 0.0013477248913089511, 0.003278876765038815, 0.9847997588085565, -0.05536464456015383, -0.09915245596529013, -0.14281000775539285] 22 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 23 - Parameters: [0.9958505153684767, 0.00681099347713056, -0.0005130156118571289, -0.016708538021305078, 0.9980334530116872, -0.0058520592510786324, 0.002139381647943121, 0.005123886345451083, 0.9835572558006382, -0.19177875314195614, -0.3709105893425417, -0.06253148497082135] 23 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 24 - Parameters: [0.994161168741664, 0.00697192732358738, 0.0008198797674601973, -0.011062933857459302, 0.9929135118018906, -0.009162688752036508, 0.0012650043590107859, -0.001236728500763471, 0.9839707961611613, -0.15093881666470896, -0.3521928482023815, -0.16192924291856564] 24 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 25 - Parameters: [0.9928036360188454, 0.0080971246719418, 0.00036814345988011606, -0.007080112460823815, 0.9954429043427959, -0.0013379176000950128, 0.0013908068304119869, 0.0019131227878601163, 0.9868611484230124, -0.21526223423090057, -0.2536754665717923, -0.2115348938128673] 25 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 26 - Parameters: [0.9947661287523859, 0.006927407749300046, 0.00002487255971741426, -0.008619352875092858, 0.9998963878054568, -0.005296339537949963, 0.0007598157378253563, -0.000018459868192420886, 0.9868463415032106, -0.16571512203622146, -0.3915841825887761, -0.10403719225306036] 26 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 27 - Parameters: [0.994926256668202, 0.006019713570205688, 0.0009413470851212496, -0.01386747836324488, 0.9972953655236866, -0.008036436639987928, 0.0021266634571773793, 0.004781010346640386, 0.9858685583313778, -0.11430391312343338, -0.43024456409605033, -0.22907953443719303] 27 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 28 - Parameters: [0.9930886279144198, 0.005106640697821607, -0.002789866433025042, -0.008188441897928311, 1.0006262689674599, -0.009596927872953437, 0.0027132433897992685, 0.0033388023000453346, 0.9851700510662562, -0.3009466224130977, -0.44518113256030245, -0.14238522130672931] 28 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 29 - Parameters: [0.9939989733900075, 0.008303323165043178, 0.0001557522819014937, -0.009741673561215088, 0.9918860627838348, 0.0015407672063526652, 0.000570713491556882, 0.0034598045820577144, 0.986495654685437, -0.1733846124151404, -0.15305887638424479, -0.0518083339628864] 29 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 30 - Parameters: [0.9946504814274449, 0.008662012764621384, 0.00039273943612415, -0.01325239137770049, 0.9921380540346115, -0.006270819294899181, 0.00048180808801287197, 0.002156216989244417, 0.9879012692782414, -0.22856949634313634, -0.23446791627842994, -0.2352030916744827] 30 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 31 - Parameters: [0.9937817389706588, 0.006858628256893003, -0.0012257650871296583, -0.003942536056325622, 0.9949398171791598, -0.002324031744013774, 0.0007616670161239166, 0.0019680312912619224, 0.9868376550883186, -0.21871326285591874, -0.16976583222588595, -0.12142959432408292] 31 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] 32 - Parameters: [0.9927397750735738, 0.009352594851319727, 0.002179534661711945, -0.006497208236507708, 0.9977143545636092, -0.006735474838243792, 0.004383467289477099, 0.0015120044774889223, 0.9879146547997021, -0.14904611678089993, -0.5013070459200255, -0.22192447755687542] 32 - Fixed Parameters: [4.861902371794869, 1.6883981510350043, -12.117616428932152] ===================== GradientCheck ... ================================ Gradient-wise checking ================================ Parameters: TranslationThreshold: 1.31773 RotationThreshold: 0.5 Inter-gradient check Artifacts:: Gradient#: AngleX AngleY AngleZ TranslationX TranslationY TranslationZ Metric(MI) 1 -0.957713 -0.125706 -0.032824 -0.253665 0.954150 -2.874946 0.103309 2 -1.029791 0.285547 0.118549 -0.017990 0.933712 -3.236238 0.100868 3 -1.267752 0.001077 0.015363 -0.351681 1.067176 -4.322706 0.098142 4 -1.136119 -0.181467 0.021365 -0.522104 1.107387 -3.227945 0.103129 5 -0.439402 -0.064897 -0.005344 -0.305749 0.501018 -2.156784 0.106612 6 -1.327186 0.295154 0.013857 -0.003471 1.327223 -3.788060 0.095608 7 -1.029120 1.097294 0.235787 0.216035 0.727129 -3.881148 0.101711 8 -1.320681 -0.133709 0.008525 -0.368676 0.970988 -3.904456 0.101029 9 -0.828866 0.876063 -0.016730 0.457981 0.656592 -3.103403 0.102835 10 -1.000710 -0.096423 -0.047880 -0.227188 0.913753 -2.968362 0.107365 11 -1.455411 0.011328 0.070126 -0.234535 1.171480 -4.101632 0.099936 12 -1.073102 -0.681201 -0.027154 -0.772507 0.976835 -3.919891 0.097946 13 -0.916436 -0.187686 0.054423 -0.441725 0.922859 -3.018872 0.098570 14 -1.249913 -0.533255 -0.001481 -0.737240 1.154301 -3.746285 0.099849 15 -0.942522 0.230158 0.023204 0.079491 0.897955 -3.436941 0.100623 16 -0.875345 0.581909 0.152475 -0.032803 0.943915 -2.949367 0.101392 17 -1.206084 -0.449341 -0.088119 -0.560197 0.804243 -3.866611 0.101254 18 -0.864948 -0.175252 -0.137645 -0.378973 0.810019 -3.383245 0.097303 19 -1.150709 0.219607 0.020003 0.010166 1.380050 -3.889955 0.101179 20 -0.521950 0.846899 0.130874 0.273385 0.596088 -2.417190 0.103148 21 -1.192983 0.377342 0.088465 0.096567 0.876304 -4.054550 0.101255 22 -0.825894 0.357376 0.157869 -0.116674 0.627979 -2.922631 0.102193 23 -0.970175 0.312282 0.114204 -0.147743 0.947946 -2.925833 0.102997 24 -1.109181 0.491907 0.067634 0.181954 0.952964 -4.058699 0.098850 25 -0.962063 0.066526 0.177228 -0.167510 0.953121 -3.427946 0.098852 26 -1.108044 -0.073030 0.055324 -0.275744 1.249292 -3.224103 0.105676 27 -1.241639 -0.775617 -0.068192 -0.794285 1.007033 -3.849911 0.098187 28 -0.962470 0.499796 0.058945 0.135229 0.855886 -3.161870 0.102171 30 -1.388163 0.203550 -0.010175 0.131346 1.038946 -4.017436 0.100314 31 -0.754037 0.324924 0.088977 0.086873 0.552093 -3.244682 0.103597 32 -0.747380 -0.287819 0.070954 -0.450183 0.714018 -3.069479 0.098658 Gradient direction #is less than 6! Too many bad gradient directions found! ===================== Included gradients: Baselines_indices: 0 QCIndex: 0 Baselines_indices: 1 QCIndex: 0 Baselines_indices: 2 QCIndex: 0 Baselines_indices: 3 QCIndex: 0 Baselines_indices: 4 QCIndex: 0 Baselines_indices: 5 QCIndex: 0 Included Gradients: 34 QCIndex: 1 ===================== Brain Mask Brain mask check NOT set. ===================== Dominant directional artifact detector... Brain mask process has been failed or is not set in protocol ================================ QC result summary: ================================ FAIL: Gradient direction #is less than 6! PASS: Left Baseline images and the left b-value are ok! FAIL: Too many bad gradient directions found!