
************************************************
The pipeline PIPE is now being processed.
Started on 24-Aug-2012 14:38:54
user: alistair, host: atlantic.nil, system: unix
************************************************
24-Aug-2012 14:38:54 - The job dcm2nii_dwi_00022          has been submitted to the queue (1 running / 0 failed / 0 finished / 30 left).
24-Aug-2012 14:39:14 - The job dcm2nii_dwi_00022          has been successfully completed (0 running / 0 failed / 1 finished / 30 left).
24-Aug-2012 14:39:14 - The job extractB0_00022            has been submitted to the queue (1 running / 0 failed / 1 finished / 29 left).
24-Aug-2012 14:39:24 - The job extractB0_00022            has been successfully completed (0 running / 0 failed / 2 finished / 29 left).
24-Aug-2012 14:39:24 - The job BET_1_00022                has been submitted to the queue (1 running / 0 failed / 2 finished / 28 left).
24-Aug-2012 14:39:45 - The job BET_1_00022                has been successfully completed (0 running / 0 failed / 3 finished / 28 left).
24-Aug-2012 14:39:45 - The job NIIcrop_00022              has been submitted to the queue (1 running / 0 failed / 3 finished / 27 left).
24-Aug-2012 14:39:55 - The job NIIcrop_00022              has been successfully completed (0 running / 0 failed / 4 finished / 27 left).
24-Aug-2012 14:39:55 - The job EDDYCURRENT_00022          has been submitted to the queue (1 running / 0 failed / 4 finished / 26 left).
24-Aug-2012 14:40:25 - The job EDDYCURRENT_00022          has been successfully completed (0 running / 0 failed / 5 finished / 26 left).
24-Aug-2012 14:40:25 - The job average_00022              has been submitted to the queue (1 running / 0 failed / 5 finished / 25 left).
24-Aug-2012 14:40:35 - The job average_00022              has been successfully completed (0 running / 0 failed / 6 finished / 25 left).
24-Aug-2012 14:40:35 - The job BET_2_00022                has been submitted to the queue (1 running / 0 failed / 6 finished / 24 left).
24-Aug-2012 14:40:55 - The job BET_2_00022                has been successfully completed (0 running / 0 failed / 7 finished / 24 left).
24-Aug-2012 14:40:55 - The job merge_00022                has been submitted to the queue (1 running / 0 failed / 7 finished / 23 left).
24-Aug-2012 14:41:05 - The job merge_00022                has been successfully completed (0 running / 0 failed / 8 finished / 23 left).
24-Aug-2012 14:41:05 - The job dtifit_00022               has been submitted to the queue (1 running / 0 failed / 8 finished / 22 left).
24-Aug-2012 14:41:15 - The job dtifit_00022               has failed                      (0 running / 1 failed / 8 finished / 22 left).

*********************************************
The processing of the pipeline is terminated.
See report below for job completion status.
24-Aug-2012 14:41:26
*********************************************
The execution of the following job has failed :

    dtifit_00022 ; 

More infos can be found in the individual log files. Use the following command to display these logs :

    psom_pipeline_visu('/home/alistair/Documents/results/logs/','log',JOB_NAME)

The following jobs have not been processed due to a dependence on a failed job or the interruption of the pipeline manager :

    FA_BeforeNormalize_00022 ; MD_BeforeNormalize_00022 ; L1_BeforeNormalize_00022 ; L23m_BeforeNormalize_00022 ; FAnormalize_00022 ; applywarp_FA_1mm_00022 ; applywarp_FA_2mm_00022 ; applywarp_MD_1mm_00022 ; applywarp_MD_2mm_00022 ; applywarp_L1_1mm_00022 ; applywarp_L1_2mm_00022 ; applywarp_L23m_1mm_00022 ; applywarp_L23m_2mm_00022 ; smoothNII_FA_2mm_00022 ; smoothNII_MD_2mm_00022 ; smoothNII_L1_2mm_00022 ; smoothNII_L23m_2mm_00022 ; atlas_FA_1mm_00022 ; atlas_MD_1mm_00022 ; atlas_L1_1mm_00022 ; atlas_L23m_1mm_00022 ; delete_tmp_file_00022 ; 

All jobs have been processed, but some jobs have failed.
You may want to restart the pipeline latter if you managed to fix the problems.
