------ Shape Analysis Module start -----


Computing ShapeAnalysisModule...

/Volumes/Data/tmp/Shape/output/
/Volumes/Data/tmp/Shape/output/ShapeAnalysisModule.bms
Number of Datas: 2
	Executing BatchMake...


Case:/Volumes/Data/tmp/Shape/8177_02_3rd_V.nii.gz

Doing Post Processing
Status: Start SegPostProcessCLP /Volumes/Data/tmp/Shape/8177_02_3rd_V.nii.gz /Volumes/Data/tmp/Shape/output/Mesh/PostProcess/8177_02_3rd_V_pp.gipl.gz --space 0.5,0.5,0.5
 run: 'SegPostProcessCLP' '''/Volumes/Data/tmp/Shape/8177_02_3rd_V.nii.gz' '/Volumes/Data/tmp/Shape/output/Mesh/PostProcess/8177_02_3rd_V_pp.gipl.gz' --space '0.5,0.5,0.5'''
Status: Finish: Execution time 7965ms

Doing GenParaMesh
Status: Start GenParaMeshCLP --EulerFile --outEulerName /Volumes/Data/tmp/Shape/output/EulerFiles/8177_02_3rd_V_euler.txt --iter 1000 --label 1 /Volumes/Data/tmp/Shape/output/Mesh/PostProcess/8177_02_3rd_V_pp.gipl.gz /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_para.vtk /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_surf.vtk
 run: 'GenParaMeshCLP' ''--EulerFile --outEulerName '/Volumes/Data/tmp/Shape/output/EulerFiles/8177_02_3rd_V_euler.txt' --iter '1000' --label '1' '/Volumes/Data/tmp/Shape/output/Mesh/PostProcess/8177_02_3rd_V_pp.gipl.gz' '/Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_para.vtk' '/Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_surf.vtk'''
Status: Finish: Execution time 1460ms

Doing ParaToSPHARMMesh
Creating Template


Status: Start ParaToSPHARMMeshCLP /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_para.vtk /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_surf.vtk /Volumes/Data/tmp/Shape/output/Template/8177_02_3rd_V_pp_surf --subdivLevel 10 --spharmDegree 15 --FinalFlip 0 --paraOut --phiIteration 100 --thetaIteration 100 --medialMesh
 run: 'ParaToSPHARMMeshCLP' '''/Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_para.vtk' '/Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_surf.vtk' '/Volumes/Data/tmp/Shape/output/Template/8177_02_3rd_V_pp_surf' --subdivLevel '10' --spharmDegree '15' --FinalFlip '0' --paraOut --phiIteration '100' --thetaIteration '100' --medialMesh''
Status: Finish: Execution time 2149ms
Error: ERROR: In /Users/kitware/Dashboards/Package/Slicer-431-package/VTK/IO/vtkDataReader.cxx, line 462
Error: vtkPolyDataReader (0x105249b50): Unable to open file: /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_surf.vtk
Error: ERROR: In /Users/kitware/Dashboards/Package/Slicer-431-package/VTK/IO/vtkDataReader.cxx, line 462
Error: vtkPolyDataReader (0x105249b50): Unable to open file: /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_para.vtk
ParaToSPHARMMesh: ERROR: In /Users/kitware/Dashboards/Package/Slicer-431-package/VTK/IO/vtkDataReader.cxx, line 462
vtkPolyDataReader (0x105249b50): Unable to open file: /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_surf.vtk

ERROR: In /Users/kitware/Dashboards/Package/Slicer-431-package/VTK/IO/vtkDataReader.cxx, line 462
vtkPolyDataReader (0x105249b50): Unable to open file: /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_para.vtk



regTemplate: 8177_02_3rd_V_pp_surfSPHARM.vtk
flipTemplate: 8177_02_3rd_V_pp_surfSPHARM.coef

Status: Start ParaToSPHARMMeshCLP /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_para.vtk /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_surf.vtk /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_surf --regTemplateFileOn --regTemplate /Volumes/Data/tmp/Shape/output/Template/8177_02_3rd_V_pp_surfSPHARM.vtk --flipTemplateOn --flipTemplate /Volumes/Data/tmp/Shape/output/Template/8177_02_3rd_V_pp_surfSPHARM.coef --subdivLevel 10 --spharmDegree 15 --FinalFlip 0 --paraOut --phiIteration 100 --thetaIteration 100 --medialMesh
 run: 'ParaToSPHARMMeshCLP' '''/Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_para.vtk' '/Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_surf.vtk' '/Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_surf' --regTemplateFileOn --regTemplate '/Volumes/Data/tmp/Shape/output/Template/8177_02_3rd_V_pp_surfSPHARM.vtk' --flipTemplateOn --flipTemplate '/Volumes/Data/tmp/Shape/output/Template/8177_02_3rd_V_pp_surfSPHARM.coef' --subdivLevel '10' --spharmDegree '15' --FinalFlip '0' --paraOut --phiIteration '100' --thetaIteration '100' --medialMesh''
Status: Finish: Execution time 2652ms
Error: ERROR: In /Users/kitware/Dashboards/Package/Slicer-431-package/VTK/IO/vtkDataReader.cxx, line 462
Error: vtkPolyDataReader (0x10534a350): Unable to open file: /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_surf.vtk
Error: ERROR: In /Users/kitware/Dashboards/Package/Slicer-431-package/VTK/IO/vtkDataReader.cxx, line 462
Error: vtkPolyDataReader (0x10534a350): Unable to open file: /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_para.vtk
ParaToSPHARMMesh: ERROR: In /Users/kitware/Dashboards/Package/Slicer-431-package/VTK/IO/vtkDataReader.cxx, line 462
vtkPolyDataReader (0x10534a350): Unable to open file: /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_surf.vtk

ERROR: In /Users/kitware/Dashboards/Package/Slicer-431-package/VTK/IO/vtkDataReader.cxx, line 462
vtkPolyDataReader (0x10534a350): Unable to open file: /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_para.vtk


/Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_02_3rd_V_pp_surf_paraPhiHalf.txt

Case:/Volumes/Data/tmp/Shape/8177_05_3rd_V.nii.gz

Doing Post Processing
Status: Start SegPostProcessCLP /Volumes/Data/tmp/Shape/8177_05_3rd_V.nii.gz /Volumes/Data/tmp/Shape/output/Mesh/PostProcess/8177_05_3rd_V_pp.gipl.gz --space 0.5,0.5,0.5
 run: 'SegPostProcessCLP' '''/Volumes/Data/tmp/Shape/8177_05_3rd_V.nii.gz' '/Volumes/Data/tmp/Shape/output/Mesh/PostProcess/8177_05_3rd_V_pp.gipl.gz' --space '0.5,0.5,0.5'''
Status: Finish: Execution time 8418ms

Doing GenParaMesh
Status: Start GenParaMeshCLP --EulerFile --outEulerName /Volumes/Data/tmp/Shape/output/EulerFiles/8177_05_3rd_V_euler.txt --iter 1000 --label 1 /Volumes/Data/tmp/Shape/output/Mesh/PostProcess/8177_05_3rd_V_pp.gipl.gz /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_05_3rd_V_pp_para.vtk /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_05_3rd_V_pp_surf.vtk
 run: 'GenParaMeshCLP' ''--EulerFile --outEulerName '/Volumes/Data/tmp/Shape/output/EulerFiles/8177_05_3rd_V_euler.txt' --iter '1000' --label '1' '/Volumes/Data/tmp/Shape/output/Mesh/PostProcess/8177_05_3rd_V_pp.gipl.gz' '/Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_05_3rd_V_pp_para.vtk' '/Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_05_3rd_V_pp_surf.vtk'''
Status: Finish: Execution time 47313ms

Doing ParaToSPHARMMesh

regTemplate: 8177_02_3rd_V_pp_surfSPHARM.vtk
flipTemplate: 8177_02_3rd_V_pp_surfSPHARM.coef

Status: Start ParaToSPHARMMeshCLP /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_05_3rd_V_pp_para.vtk /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_05_3rd_V_pp_surf.vtk /Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_05_3rd_V_pp_surf --regTemplateFileOn --regTemplate /Volumes/Data/tmp/Shape/output/Template/8177_02_3rd_V_pp_surfSPHARM.vtk --flipTemplateOn --flipTemplate /Volumes/Data/tmp/Shape/output/Template/8177_02_3rd_V_pp_surfSPHARM.coef --subdivLevel 10 --spharmDegree 15 --FinalFlip 0 --paraOut --phiIteration 100 --thetaIteration 100 --medialMesh
 run: 'ParaToSPHARMMeshCLP' '''/Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_05_3rd_V_pp_para.vtk' '/Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_05_3rd_V_pp_surf.vtk' '/Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_05_3rd_V_pp_surf' --regTemplateFileOn --regTemplate '/Volumes/Data/tmp/Shape/output/Template/8177_02_3rd_V_pp_surfSPHARM.vtk' --flipTemplateOn --flipTemplate '/Volumes/Data/tmp/Shape/output/Template/8177_02_3rd_V_pp_surfSPHARM.coef' --subdivLevel '10' --spharmDegree '15' --FinalFlip '0' --paraOut --phiIteration '100' --thetaIteration '100' --medialMesh''
Status: Finish: Execution time 3886ms
/Volumes/Data/tmp/Shape/output/Mesh/SPHARM/8177_05_3rd_V_pp_surf_paraPhiHalf.txt

	Executing BatchMake: Error!
	Executing BatchMake: Done!



Execute Meshmath...

Mapping parameters in SPHARM template meshes using MeshMath
Path for MeshMathTemplate: /Volumes/Data/tmp/Shape/output/Template/
DONE COMPUTING SPHARM