****************************************** The pipeline PIPE is now being processed. Started on 09-Dec-2015 11:33:18 user: n9, host: Morfeo.local, system: unix ****************************************** 09-Dec-2015 11:33:18 Split_WMLabel submitted (1 run / 0 fail / 0 done / 51 left) 09-Dec-2015 11:33:18 Split_WMProbtract submitted (2 run / 0 fail / 0 done / 50 left) 09-Dec-2015 11:33:18 dcm2nii_dwi_00001 submitted (3 run / 0 fail / 0 done / 49 left) 09-Dec-2015 11:33:28 dcm2nii_dwi_00001 completed (2 run / 0 fail / 1 done / 49 left) 09-Dec-2015 11:33:28 DataParameters_00001 submitted (3 run / 0 fail / 1 done / 48 left) 09-Dec-2015 11:33:28 extractB0_00001 submitted (4 run / 0 fail / 1 done / 47 left) 09-Dec-2015 11:33:38 DataParameters_00001 completed (3 run / 0 fail / 2 done / 47 left) 09-Dec-2015 11:33:38 ExportParametersToExcel submitted (4 run / 0 fail / 2 done / 46 left) 09-Dec-2015 11:33:48 Split_WMProbtract completed (3 run / 0 fail / 3 done / 46 left) 09-Dec-2015 11:33:48 ExportParametersToExcel completed (2 run / 0 fail / 4 done / 46 left) 09-Dec-2015 11:34:08 Split_WMLabel completed (1 run / 0 fail / 5 done / 46 left) . 09-Dec-2015 11:35:48 extractB0_00001 completed (0 run / 0 fail / 6 done / 46 left) 09-Dec-2015 11:35:48 BET_1_00001 submitted (1 run / 0 fail / 6 done / 45 left) 09-Dec-2015 11:36:09 BET_1_00001 completed (0 run / 0 fail / 7 done / 45 left) 09-Dec-2015 11:36:09 Split_Crop_00001 submitted (1 run / 0 fail / 7 done / 44 left) . 09-Dec-2015 11:38:09 Split_Crop_00001 completed (0 run / 0 fail / 8 done / 44 left) 09-Dec-2015 11:38:09 EDDYCURRENT_00001 submitted (1 run / 0 fail / 8 done / 43 left) ..... 09-Dec-2015 11:44:40 EDDYCURRENT_00001 completed (0 run / 0 fail / 9 done / 43 left) 09-Dec-2015 11:44:40 average_00001 submitted (1 run / 0 fail / 9 done / 42 left) 09-Dec-2015 11:44:50 average_00001 completed (0 run / 0 fail / 10 done / 42 left) 09-Dec-2015 11:44:50 BET_2_00001 submitted (1 run / 0 fail / 10 done / 41 left) 09-Dec-2015 11:45:11 BET_2_00001 completed (0 run / 0 fail / 11 done / 41 left) 09-Dec-2015 11:45:11 merge_00001 submitted (1 run / 0 fail / 11 done / 40 left) ......... 09-Dec-2015 11:56:23 merge_00001 completed (0 run / 0 fail / 12 done / 40 left) 09-Dec-2015 11:56:23 LDH_00001 submitted (1 run / 0 fail / 12 done / 39 left) 09-Dec-2015 11:56:23 dtifit_00001 submitted (2 run / 0 fail / 12 done / 38 left) 09-Dec-2015 11:56:33 LDH_00001 failed (1 run / 1 fail / 12 done / 38 left) 09-Dec-2015 11:56:53 dtifit_00001 completed (0 run / 1 fail / 13 done / 38 left) 09-Dec-2015 11:56:53 BeforeNormalize_FA_00001 submitted (1 run / 1 fail / 13 done / 37 left) 09-Dec-2015 11:56:53 BeforeNormalize_MD_00001 submitted (2 run / 1 fail / 13 done / 36 left) 09-Dec-2015 11:56:53 BeforeNormalize_L1_00001 submitted (3 run / 1 fail / 13 done / 35 left) 09-Dec-2015 11:56:53 BeforeNormalize_L23m_00001 submitted (4 run / 1 fail / 13 done / 34 left) 09-Dec-2015 11:57:13 BeforeNormalize_FA_00001 completed (3 run / 1 fail / 14 done / 34 left) 09-Dec-2015 11:57:13 BeforeNormalize_MD_00001 completed (2 run / 1 fail / 15 done / 34 left) 09-Dec-2015 11:57:13 BeforeNormalize_L1_00001 completed (1 run / 1 fail / 16 done / 34 left) 09-Dec-2015 11:57:13 BeforeNormalize_L23m_00001 completed (0 run / 1 fail / 17 done / 34 left) 09-Dec-2015 11:57:13 FAnormalize_00001 submitted (1 run / 1 fail / 17 done / 33 left) .. 09-Dec-2015 11:59:54 FAnormalize_00001 completed (0 run / 1 fail / 18 done / 33 left) 09-Dec-2015 11:59:54 applywarp_FA_1mm_00001 submitted (1 run / 1 fail / 18 done / 32 left) 09-Dec-2015 11:59:54 applywarp_MD_1mm_00001 submitted (2 run / 1 fail / 18 done / 31 left) 09-Dec-2015 11:59:54 applywarp_L1_1mm_00001 submitted (3 run / 1 fail / 18 done / 30 left) 09-Dec-2015 11:59:54 applywarp_L23m_1mm_00001 submitted (4 run / 1 fail / 18 done / 29 left) 09-Dec-2015 12:00:14 applywarp_FA_1mm_00001 completed (3 run / 1 fail / 19 done / 29 left) 09-Dec-2015 12:00:14 applywarp_MD_1mm_00001 completed (2 run / 1 fail / 20 done / 29 left) 09-Dec-2015 12:00:14 applywarp_L1_1mm_00001 completed (1 run / 1 fail / 21 done / 29 left) 09-Dec-2015 12:00:14 applywarp_L23m_1mm_00001 completed (0 run / 1 fail / 22 done / 29 left) 09-Dec-2015 12:00:14 applywarp_FA_2mm_00001 submitted (1 run / 1 fail / 22 done / 28 left) 09-Dec-2015 12:00:14 applywarp_MD_2mm_00001 submitted (2 run / 1 fail / 22 done / 27 left) 09-Dec-2015 12:00:14 applywarp_L1_2mm_00001 submitted (3 run / 1 fail / 22 done / 26 left) 09-Dec-2015 12:00:14 applywarp_L23m_2mm_00001 submitted (4 run / 1 fail / 22 done / 25 left) 09-Dec-2015 12:00:24 applywarp_FA_2mm_00001 completed (3 run / 1 fail / 23 done / 25 left) 09-Dec-2015 12:00:24 applywarp_MD_2mm_00001 completed (2 run / 1 fail / 24 done / 25 left) 09-Dec-2015 12:00:24 applywarp_L1_2mm_00001 completed (1 run / 1 fail / 25 done / 25 left) 09-Dec-2015 12:00:24 applywarp_L23m_2mm_00001 completed (0 run / 1 fail / 26 done / 25 left) 09-Dec-2015 12:00:24 smoothNII_FA_2mm_00001 submitted (1 run / 1 fail / 26 done / 24 left) 09-Dec-2015 12:00:24 smoothNII_MD_2mm_00001 submitted (2 run / 1 fail / 26 done / 23 left) 09-Dec-2015 12:00:24 smoothNII_L1_2mm_00001 submitted (3 run / 1 fail / 26 done / 22 left) 09-Dec-2015 12:00:24 smoothNII_L23m_2mm_00001 submitted (4 run / 1 fail / 26 done / 21 left) 09-Dec-2015 12:00:34 smoothNII_FA_2mm_00001 completed (3 run / 1 fail / 27 done / 21 left) 09-Dec-2015 12:00:34 smoothNII_MD_2mm_00001 completed (2 run / 1 fail / 28 done / 21 left) 09-Dec-2015 12:00:34 smoothNII_L1_2mm_00001 completed (1 run / 1 fail / 29 done / 21 left) 09-Dec-2015 12:00:34 smoothNII_L23m_2mm_00001 completed (0 run / 1 fail / 30 done / 21 left) 09-Dec-2015 12:00:34 atlas_FA_1mm_00001 submitted (1 run / 1 fail / 30 done / 20 left) 09-Dec-2015 12:00:34 atlas_MD_1mm_00001 submitted (2 run / 1 fail / 30 done / 19 left) 09-Dec-2015 12:00:34 atlas_L1_1mm_00001 submitted (3 run / 1 fail / 30 done / 18 left) 09-Dec-2015 12:00:34 atlas_L23m_1mm_00001 submitted (4 run / 1 fail / 30 done / 17 left) 09-Dec-2015 12:01:35 atlas_FA_1mm_00001 completed (3 run / 1 fail / 31 done / 17 left) 09-Dec-2015 12:01:35 atlas_MD_1mm_00001 completed (2 run / 1 fail / 32 done / 17 left) 09-Dec-2015 12:01:35 atlas_L1_1mm_00001 completed (1 run / 1 fail / 33 done / 17 left) 09-Dec-2015 12:01:35 atlas_L23m_1mm_00001 completed (0 run / 1 fail / 34 done / 17 left) 09-Dec-2015 12:01:35 ExportAtlasResults_FA_ToExcel submitted (1 run / 1 fail / 34 done / 16 left) 09-Dec-2015 12:01:35 ExportAtlasResults_MD_ToExcel submitted (2 run / 1 fail / 34 done / 15 left) 09-Dec-2015 12:01:35 ExportAtlasResults_L1_ToExcel submitted (3 run / 1 fail / 34 done / 14 left) 09-Dec-2015 12:01:35 ExportAtlasResults_L23m_ToExcel submitted (4 run / 1 fail / 34 done / 13 left) 09-Dec-2015 12:01:45 ExportAtlasResults_FA_ToExcel completed (3 run / 1 fail / 35 done / 13 left) 09-Dec-2015 12:01:45 ExportAtlasResults_MD_ToExcel completed (2 run / 1 fail / 36 done / 13 left) 09-Dec-2015 12:01:45 ExportAtlasResults_L1_ToExcel completed (1 run / 1 fail / 37 done / 13 left) 09-Dec-2015 12:01:45 ExportAtlasResults_L23m_ToExcel completed (0 run / 1 fail / 38 done / 13 left) ********************************************* The processing of the pipeline is terminated. See report below for job completion status. 09-Dec-2015 12:01:45 ********************************************* The execution of the following job has failed : LDH_00001 ; More infos can be found in the individual log files. Use the following command to display these logs : psom_pipeline_visu('/Users/n9/Desktop/PANDA/RESULT/logs/','log',JOB_NAME) The following jobs have not been processed due to a dependence on a failed job or the interruption of the pipeline manager : BeforeNormalize_LDHs_00001 ; BeforeNormalize_LDHk_00001 ; applywarp_LDHs_1mm_00001 ; applywarp_LDHk_1mm_00001 ; applywarp_LDHs_2mm_00001 ; applywarp_LDHk_2mm_00001 ; smoothNII_LDHs_2mm_00001 ; smoothNII_LDHk_2mm_00001 ; atlas_LDHs_1mm_00001 ; atlas_LDHk_1mm_00001 ; delete_tmp_file_00001 ; ExportAtlasResults_LDHs_ToExcel ; ExportAtlasResults_LDHk_ToExcel ; All jobs have been processed, but some jobs have failed. You may want to restart the pipeline latter if you managed to fix the problems.