help > Unable to read Shen atlas in CONN
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May 9, 2019  12:05 PM | Gerome Manson
Unable to read Shen atlas in CONN
Hello, 

I am getting the following error message when trying to read in the shen parcellation (attached) in CONN. Any words of advice 

Error using conn_menu>conn_spm_read_vols (line 1090)
Error reading file /Volumes/g_drive/CONN/shen_parcellation/shen_2mm_268_parcellation.nii. File may have been modified or relocated. Please load file again

Error in conn_menu (line 665)
[temp,volhdr]=conn_spm_read_vols(title);
Error in conn (line 3268)
conn_menu('update',CONN_h.menus.m_setup_00{5},vol);
Error in conn_filesearchtool (line 222)
if length(h.callback)>1, feval(h.callback{1},h.callback{2:end},names); else, feval(h.callback{1},names); end
CONN18.b
SPM12 + DEM FieldMap MEEGtools
Matlab v.2018b
project: CONN18.b
storage: 337.0Gb available
spm @ /Users/mansonge/Documents/spm12
conn @ /Users/mansonge/Documents/conn
May 26, 2019  07:05 PM | Alfonso Nieto-Castanon - Boston University
RE: Unable to read Shen atlas in CONN
Hi Gerome,

As far as I can tell the issue here is that your shen parcellation file seems corrupted, the full file (from https://www.nitrc.org/projects/bioimages...) should be around 3 Mb while your version is only around 750 Kb. I would recommend simply to download it again and re-import it into CONN

Best
Alfonso
Originally posted by Gerome Manson:
Hello, 

I am getting the following error message when trying to read in the shen parcellation (attached) in CONN. Any words of advice 

Error using conn_menu>conn_spm_read_vols (line 1090)
Error reading file /Volumes/g_drive/CONN/shen_parcellation/shen_2mm_268_parcellation.nii. File may have been modified or relocated. Please load file again

Error in conn_menu (line 665)
[temp,volhdr]=conn_spm_read_vols(title);
Error in conn (line 3268)
conn_menu('update',CONN_h.menus.m_setup_00{5},vol);
Error in conn_filesearchtool (line 222)
if length(h.callback)>1, feval(h.callback{1},h.callback{2:end},names); else, feval(h.callback{1},names); end
CONN18.b
SPM12 + DEM FieldMap MEEGtools
Matlab v.2018b
project: CONN18.b
storage: 337.0Gb available
spm @ /Users/mansonge/Documents/spm12
conn @ /Users/mansonge/Documents/conn