open-discussion > Couldn't see QC results
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Dec 3, 2019  06:12 AM | Jayashree Chandrasekaran
Couldn't see QC results
Hello,

I recently downloaded the DTIPrep on my mac (OS - Sierra) including the Slicer and FSL software. I ran the DTIPrep through GUI with default protocol on one of the DWI NRRD files (used DWIConvert to obtain NRRD file from DICOM), but I can only see incomplete QC report text file on the output folder. The QC results tab on the GUI is empty and doesn't contain the results. I'd really appreciate any help on fixing this issue.

The protocol paths were automatically set except for bet2 and Slicer.


Thank you!

Jayashree
Dec 5, 2019  06:12 AM | Martin Styner
RE: Couldn't see QC results
Not sure what's going wrong, can you post the content of the QC report text file?
Using the protocol tab, can you post which steps are scheduled to be done (or you could attach the protocol file that you used)

Best
Martin

Originally posted by Jayashree Chandrasekaran:
Hello,

I recently downloaded the DTIPrep on my mac (OS - Sierra) including the Slicer and FSL software. I ran the DTIPrep through GUI with default protocol on one of the DWI NRRD files (used DWIConvert to obtain NRRD file from DICOM), but I can only see incomplete QC report text file on the output folder. The QC results tab on the GUI is empty and doesn't contain the results. I'd really appreciate any help on fixing this issue.

The protocol paths were automatically set except for bet2 and Slicer.


Thank you!

Jayashree
Dec 6, 2019  01:12 PM | Jayashree Chandrasekaran
RE: Couldn't see QC results
Hi Martin,

Please find attached screenshots of the protocol and result tab and QC report text file.


Appreciate your help!

Jayashree
Attachment: dtiPrep_results.png
Dec 6, 2019  01:12 PM | Jayashree Chandrasekaran
RE: Couldn't see QC results
QC-Report file
Dec 6, 2019  01:12 PM | Jayashree Chandrasekaran
RE: Couldn't see QC results
Protocol file