This thread is a starting point for collecting information about publicly accessible 'Lab Notebooks'. Lab notebooks often contain lots of valuable information about how and why various types of processing and analysis are performed. Yes, they may be locally dependent, but many of the solutions that are used have very common and wide-spread applicability.

Know of a lab notebook? Add it to the thread!

Anyone is welcome to peruse my lab wiki, which contains a variety of step-by-step recipes for AFNI, FreeSurfer and DTI Query.
The URL is
http://openwetware.org/wiki/Beauchamp:La...

Mike Beauchamp