help > Alpha release of SpineSegmentation module
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Mar 25, 2010  07:03 PM | zj chen
Alpha release of SpineSegmentation module
The SpineSegmentation module for automated segmentation of the spine in MRI images has now been released! Note that this is an alpha release. Any requests or comments are welcome at .

Download instructions:

- choose a username and register on NITRC
- follow the 'Source Code' link on the left column of http://www.nitrc.org/projects/sylvainpro...
- copy the svn command line in your terminal and paste it in your terminal
- replace 'username' with the name you chose when you registered on NITRC

Build instructions:

- first build 3DSlicer (follow link 'For Developers' at http://slicer.org)
- create a directory SpineSegmentation-build
- type /CMake-build/bin/cmake
- after SLICER_DIR type the
- type 'c' until you see 'Generate' in the lower menu of CMake
- type 'g' and exit
- type 'make' in your terminal
- copy all files in lib/Slicer3/Plugins/ to /lib/Slicer3/Plugins/

Enjoy! Email me at for any comment or request.

Sylvain Jaume, PhD
MIT Computer Science and Artificial Intelligence Laboratory
May 28, 2011  01:05 PM | john posey
RE: Alpha release of SpineSegmentation module
I need help in loading the spine slicer module. You can reach me :
[url=mailto:jposey@tulane.edu]jposey@tulane.edu[/url]
Thanks in advance, John Posey
Jun 23, 2011  11:06 AM | Dhruv Lamba
RE: Alpha release of SpineSegmentation module
Hi Sylvain,

I am running 3D slicer on Windows; and using Tortoise SVN for checking out the source code. However, the server repeatedly gives me a 403 error (Forbidden) when I try to access the repository.
Please advise,

-Dhruv Lamba
PhD student, Johns Hopkins
Jun 23, 2011  11:06 AM | Dhruv Lamba
RE: Alpha release of SpineSegmentation module
I actually even tried checking out from a terminal; but received the same error. Any help would be greatly appreciated;
Sincerely,

-Dhruv