sdm-help-list > SDM can't find my txt file despite the correct spelling
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Jun 19, 2024  10:06 AM | psyhelen
SDM can't find my txt file despite the correct spelling

Dear Developers of SDM,


I hope all is well. I am encountering an issues during the preprocessing stage as SDM could not find the txt file under the working directory.


 


The file that could not be traced was called 'Fang.spm_mni.txt'. However, as indicated in the photo attachment, the file with the exact name is actually in the working directory.


 


I have also attached the execution log below, could you please provide me with some suggestions regards how to solve this issue? I have tried to change the file names several times, but the txt file remained undetectable by the software. Thank you in advance for your time and assistance.


 


Kind regards,


Helen 


--- Execution Log ---


$ C:/Users/Psychology/Documents/PsyToolbox/SDM/bin/windows64/sdm_parse.exe pp gray matter, 1, 20, gray matter, 2


Home dir C:\Users\Psychology\sdm.conf


Load atlas C:\Users\Psychology\Documents\PsyToolbox\SDM\bin\windows64\..\..\/share/atlas_aal_cts_2mm.nii.gz


length 902629 sdm1_lengt 902629


aAnalyzing coordinates


.


 


.


.


 


.


 


.


 


.


 


.


 


.


 


.


 


 


 


WARNING: File 'Fang.nii.gz', 'Fang.spm_mni.txt', 'Fang.fsl_mni.txt', 'Fang.other_mni.txt', 'Fang.spm_brett.txt', 'Fang.fsl_brett.txt', 'Fang.other_tal.txt' or 'Fang.no_peaks.txt' not found.


The program will close as this problem could cause fatal errors.


 


 

Attachment: Capture.PNG
Jul 2, 2024  03:07 PM | Xinyun Lin
RE: SDM can't find my txt file despite the correct spelling

Hello, I'm having the same problem, have you solved this issue please? Can you tell me what to do with it?


 


Originally posted by psyhelen:



Dear Developers of SDM,


I hope all is well. I am encountering an issues during the preprocessing stage as SDM could not find the txt file under the working directory.


 


The file that could not be traced was called 'Fang.spm_mni.txt'. However, as indicated in the photo attachment, the file with the exact name is actually in the working directory.


 


I have also attached the execution log below, could you please provide me with some suggestions regards how to solve this issue? I have tried to change the file names several times, but the txt file remained undetectable by the software. Thank you in advance for your time and assistance.


 


Kind regards,


Helen 


--- Execution Log ---


$ C:/Users/Psychology/Documents/PsyToolbox/SDM/bin/windows64/sdm_parse.exe pp gray matter, 1, 20, gray matter, 2


Home dir C:\Users\Psychology\sdm.conf


Load atlas C:\Users\Psychology\Documents\PsyToolbox\SDM\bin\windows64\..\..\/share/atlas_aal_cts_2mm.nii.gz


length 902629 sdm1_lengt 902629


aAnalyzing coordinates


.


 


.


.


 


.


 


.


 


.


 


.


 


.


 


.


 


 


 


WARNING: File 'Fang.nii.gz', 'Fang.spm_mni.txt', 'Fang.fsl_mni.txt', 'Fang.other_mni.txt', 'Fang.spm_brett.txt', 'Fang.fsl_brett.txt', 'Fang.other_tal.txt' or 'Fang.no_peaks.txt' not found.


The program will close as this problem could cause fatal errors.


 


 



 

Jul 11, 2024  05:07 AM | psyhelen
RE: SDM can't find my txt file despite the correct spelling

Hi there,


No, the problem remains outstanding. Do you have any luck resolving this error?


 


 


Originally posted by Xinyun Lin:



Hello, I'm having the same problem, have you solved this issue please? Can you tell me what to do with it?


 


Originally posted by psyhelen:



Dear Developers of SDM,


I hope all is well. I am encountering an issues during the preprocessing stage as SDM could not find the txt file under the working directory.


 


The file that could not be traced was called 'Fang.spm_mni.txt'. However, as indicated in the photo attachment, the file with the exact name is actually in the working directory.


 


I have also attached the execution log below, could you please provide me with some suggestions regards how to solve this issue? I have tried to change the file names several times, but the txt file remained undetectable by the software. Thank you in advance for your time and assistance.


 


Kind regards,


Helen 


--- Execution Log ---


$ C:/Users/Psychology/Documents/PsyToolbox/SDM/bin/windows64/sdm_parse.exe pp gray matter, 1, 20, gray matter, 2


Home dir C:\Users\Psychology\sdm.conf


Load atlas C:\Users\Psychology\Documents\PsyToolbox\SDM\bin\windows64\..\..\/share/atlas_aal_cts_2mm.nii.gz


length 902629 sdm1_lengt 902629


aAnalyzing coordinates


.


 


.


.


 


.


 


.


 


.


 


.


 


.


 


.


 


 


 


WARNING: File 'Fang.nii.gz', 'Fang.spm_mni.txt', 'Fang.fsl_mni.txt', 'Fang.other_mni.txt', 'Fang.spm_brett.txt', 'Fang.fsl_brett.txt', 'Fang.other_tal.txt' or 'Fang.no_peaks.txt' not found.


The program will close as this problem could cause fatal errors.


 


 



 



 

Jul 31, 2024  09:07 AM | psyhelen
RE: SDM can't find my txt file despite the correct spelling

Problem solved, please try different combinations of naming (e.g., removing the prefix or suffix of the file, and change the filename to a completely different one and see if it works).


 


Originally posted by psyhelen:



Hi there,


No, the problem remains outstanding. Do you have any luck resolving this error?


 


 


Originally posted by Xinyun Lin:



Hello, I'm having the same problem, have you solved this issue please? Can you tell me what to do with it?


 


Originally posted by psyhelen:



Dear Developers of SDM,


I hope all is well. I am encountering an issues during the preprocessing stage as SDM could not find the txt file under the working directory.


 


The file that could not be traced was called 'Fang.spm_mni.txt'. However, as indicated in the photo attachment, the file with the exact name is actually in the working directory.


 


I have also attached the execution log below, could you please provide me with some suggestions regards how to solve this issue? I have tried to change the file names several times, but the txt file remained undetectable by the software. Thank you in advance for your time and assistance.


 


Kind regards,


Helen 


--- Execution Log ---


$ C:/Users/Psychology/Documents/PsyToolbox/SDM/bin/windows64/sdm_parse.exe pp gray matter, 1, 20, gray matter, 2


Home dir C:\Users\Psychology\sdm.conf


Load atlas C:\Users\Psychology\Documents\PsyToolbox\SDM\bin\windows64\..\..\/share/atlas_aal_cts_2mm.nii.gz


length 902629 sdm1_lengt 902629


aAnalyzing coordinates


.


 


.


.


 


.


 


.


 


.


 


.


 


.


 


.


 


 


 


WARNING: File 'Fang.nii.gz', 'Fang.spm_mni.txt', 'Fang.fsl_mni.txt', 'Fang.other_mni.txt', 'Fang.spm_brett.txt', 'Fang.fsl_brett.txt', 'Fang.other_tal.txt' or 'Fang.no_peaks.txt' not found.


The program will close as this problem could cause fatal errors.