open-discussion > Improving visualization of clusters in MRIcroGL - Finding corresponding AFNI colormap "Reds_and_blues_Inv" in MRIcroGL?
Showing 1-3 of 3 posts
Jul 10, 2024 04:07 PM | benedetta cecconi
Improving visualization of clusters in MRIcroGL - Finding corresponding AFNI colormap "Reds_and_blues_Inv" in MRIcroGL?
Hello,
I have completed an analysis in Afni, where my clusters are clearly rendered in their GUI with distinct red and blue colors (colormap "Reds_and_Blues_Inv") - see the attached picture "precuneus":
However, when I plot these clusters in MRIcroGL to have nicer
definition/view etc, I can't find a suitable colormap or method to
enhance the colors effectively and show the clusters nicely.
Clusters look grainy/blurred and the final image is either elegant
nor clear, even if this mosaic view would be very nice to visualize
our results: