help > Line profile export
Showing 1-3 of 3 posts
Dec 7, 2010 09:12 PM | Jichao Chen
Line profile export
Hi Hanchuan,
Is there way to export the pixel intensity in the line profile plot, i.e. position along the line, pixel values in 3 channels (screenshot attached)?
Thanks,
Jichao
Is there way to export the pixel intensity in the line profile plot, i.e. position along the line, pixel values in 3 channels (screenshot attached)?
Thanks,
Jichao
Dec 8, 2010 04:12 AM | Hanchuan Peng
RE: Line profile export
isn't it a text file is automatically saved to display the profile?
If not, since you have the src code, you can easily add the saving function after the computation. I will be happy to patch it.
Or, you can submit a request for feature in the tracker forum, and we can follow up there, but may take a while as we are adding other features right now.
----------------------------------
V3D official website: http://penglab.janelia.org/proj/v3d/
V3D mailing list: http://listserv.janelia.org/pipermail/v3...
V3D discussion forum: http://www.nitrc.org/projects/v3d/
* V3D lets you explore & understand your
large 3D/4D/5D images a lot easier!
- fast 3D+ image visualization and analysis,
WYSIWYG, and easy plugin interface:
http://penglab.janelia.org/proj/v3d
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Originally posted by Jichao Chen:
If not, since you have the src code, you can easily add the saving function after the computation. I will be happy to patch it.
Or, you can submit a request for feature in the tracker forum, and we can follow up there, but may take a while as we are adding other features right now.
----------------------------------
V3D official website: http://penglab.janelia.org/proj/v3d/
V3D mailing list: http://listserv.janelia.org/pipermail/v3...
V3D discussion forum: http://www.nitrc.org/projects/v3d/
* V3D lets you explore & understand your
large 3D/4D/5D images a lot easier!
- fast 3D+ image visualization and analysis,
WYSIWYG, and easy plugin interface:
http://penglab.janelia.org/proj/v3d
----------------------------------
Originally posted by Jichao Chen:
Hi Hanchuan,
Is there way to export the pixel intensity in the line profile plot, i.e. position along the line, pixel values in 3 channels (screenshot attached)?
Thanks,
Jichao
[/userquote]
Is there way to export the pixel intensity in the line profile plot, i.e. position along the line, pixel values in 3 channels (screenshot attached)?
Thanks,
Jichao
[/userquote]
May 16, 2019 06:05 AM | Sarah Goethals
RE: Line profile export
Hi Hanchuan,
I am using Vaa3d 3.2 (newer version don't work on my Mac) on Mac OS El Capitan (10.11.6) and I would like to export the pixels intensity profile of traced segments. Is it possible? No txt file is generated and I am not sure how to modify the src code.
Thanks,
Sarah
I am using Vaa3d 3.2 (newer version don't work on my Mac) on Mac OS El Capitan (10.11.6) and I would like to export the pixels intensity profile of traced segments. Is it possible? No txt file is generated and I am not sure how to modify the src code.
Thanks,
Sarah