open-discussion > Bioimage suite: objectmap statistics
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Oct 5, 2011  08:10 AM | Eero Hippeläinen
Bioimage suite: objectmap statistics
Hi every1!

I'm trying to do some very basic VOi analysis of SPECT images. I'm currenyly using object maps with three different volumes. I register SPECT images with template and run VOI Volume / Stats computation from object map dropdown menu (transform window in brain register). This way I can get some statistics like mean, std, max and volumes. But I would like to have bit more like sum of voxel values and min values.

The Question is: Can I have more statistics of VOI some how? if yes, please help me out. I can do some coding so I'm not afraid to dive deep in to the program.

Thank you!
 Eero
Oct 5, 2011  08:10 AM | Eero Hippeläinen
RE: Bioimage suite: objectmap statistics
Foolish me!

Of course I can get sum of voxel values, but how about min value... also it would be nice to do some simple calculations with the values.

thanks 
 Eero
Oct 7, 2011  05:10 AM | Xenophon Papademetris
RE: Bioimage suite: objectmap statistics
We don't have min value unfortunately programmed in. You should be able to get max value though, so multiple your image by -1 and try again.

Xenios