open-discussion > error when running pycluster roi test script
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Dec 3, 2012 09:12 PM | Amy Anderson
error when running pycluster roi test script
After following the instructions on the installation page and
running command:
python pyClusterROI_test.py
I received the following errors:
bash-3.2$ python pyClusterROI_test.py
Traceback (most recent call last):
File "pyClusterROI_test.py", line 48, in
from make_local_connectivity_scorr import *
File "/Users/matthewnye/Downloads/pyClusterROI/make_local_connectivity_scorr.py", line 40, in
from scipy.sparse.linalg.eigen.arpack import eigen_symmetric
ImportError: cannot import name eigen_symmetric
I looked into the eigen_symmetric function in scipy and it is apparently called 'eigs' in the more recent versions (0.9 +). I have installed 0.11 so this may be the issue. Also when looking at the two modules that load eigen_symmetric - make_local_connectivity_scorr and make_local_connectivity_tcorr it seems they import the eigen_symmetric module but then they never end up calling any function from it, so it seems to serve no function.
any information about or a solution for this error would be appreciated.
python pyClusterROI_test.py
I received the following errors:
bash-3.2$ python pyClusterROI_test.py
Traceback (most recent call last):
File "pyClusterROI_test.py", line 48, in
from make_local_connectivity_scorr import *
File "/Users/matthewnye/Downloads/pyClusterROI/make_local_connectivity_scorr.py", line 40, in
from scipy.sparse.linalg.eigen.arpack import eigen_symmetric
ImportError: cannot import name eigen_symmetric
I looked into the eigen_symmetric function in scipy and it is apparently called 'eigs' in the more recent versions (0.9 +). I have installed 0.11 so this may be the issue. Also when looking at the two modules that load eigen_symmetric - make_local_connectivity_scorr and make_local_connectivity_tcorr it seems they import the eigen_symmetric module but then they never end up calling any function from it, so it seems to serve no function.
any information about or a solution for this error would be appreciated.