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open-discussion > repetitive VTK error
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Dec 4, 2012 02:12 PM | hannah kyllo
repetitive VTK error
I've been receiving the following message periodically while using
bioimage:
ERROR: ln../../../build/vtk52/Filtering/vtkImageData.cxx, line2133
vtkImageData(2BEB2D40): Coordinate (0,0,0) outside of array (max = -1
It usually occurs while I am using the Brain Register tools (half-way through a registration, or immediately upon loading a reference or transform image), and results in the entire program crashing, and all my data being lost. Any insight into this would be appreciated.
ERROR: ln../../../build/vtk52/Filtering/vtkImageData.cxx, line2133
vtkImageData(2BEB2D40): Coordinate (0,0,0) outside of array (max = -1
It usually occurs while I am using the Brain Register tools (half-way through a registration, or immediately upon loading a reference or transform image), and results in the entire program crashing, and all my data being lost. Any insight into this would be appreciated.
Dec 4, 2012 03:12 PM | Xenophon Papademetris
repetitive VTK error
This sounds like a on out of memory issue. On Windows BioImage
Suite can only use about 2.5-3 GB of RAM and if you have large-ish
images (e.g. 512x512) this can be an issue. You may want to
resample your images to be about 1mm isotropic (instead of some CTs
which are 0.5 mm).