open-discussion > Bioimage suite cant find FSL
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Jul 26, 2016  04:07 AM | boshra shams - INM4 fz-juelich
Bioimage suite cant find FSL
Dear all,

I have some problem with bioimagesuite, I installed both Bioimagesuite and FSL but unfortunately the bioimagesuite software cant find FSL.
I would like to know does anyone else had this problem before who can help me with this?

best,
Shams
Jul 26, 2016  10:07 AM | Xenophon Papademetris
Bioimage suite cant find FSL
What operating system are you using? What version of FSL?
Oct 23, 2017  04:10 AM | boshra shams - INM4 fz-juelich
RE: Bioimage suite cant find FSL
Hi

my operating system is 14.04 LTS and my FSL version is 4.0.1.

Many thanks in advance.
Oct 24, 2017  05:10 AM | Xenophon Papademetris
RE: Bioimage suitecant find FSL
Where is FSL installed?
Oct 26, 2017  12:10 PM | boshra shams - INM4 fz-juelich
RE: Bioimage suite cant find FSL
FSL is installed in /home folder the where BioImage Suite is also installed
Oct 26, 2017  01:10 PM | Xenophon Papademetris
RE: Bioimage suitecant find FSL
FSL - specifically fast and bet needs to be in your path before you call BioImage Suite. What platform are you on?