Dear sir,

I would like to ask:

Is there a straightforward way to export Vaa3D neuron2 App2 tracings (which are swc files) for analysis in imagej, and also matlab? 

Also, may I ask whether there's a way to export statistics calculated in Vaa3D (e.g. those made from "compute global features" under "neuron utilities" in the plugin menu)?

Thanks a lot for your help.

In FIji(ImageJ), there is a plugin can be used to import swc file directly, please check their websit. In Matlab, please check here https://github.com/Vaa3D/Vaa3D_Wiki/wiki...

You can use command line to run Vaa3D plugin and then copy the output from terminal. How to use command line, please check here https://github.com/Vaa3D/Vaa3D_Wiki/wiki...

Hiya! Just so you know, ever since a FIJI update at some point late last year, Simple Neurite Tracer has not been able to import Vaa3D-created swc files. This appears to be due to it not recognising the node type (second column in an swc numbers matrix). It turns out that if you use Matlab, for example, to replace all the numbers in that column (normally 274) to 0 then FIJI will easily open the swc. Hope this helps.

Noted. Thank you all for your help.