Hello BrainNet experts,

I am trying to add a volume to a surface file. For that purpose, I used the surface files provided with the packages. But, I can't see any activation within Basal Ganglia, although it's clearly visible in SPM12. Any help with this will greatly appreciated.

Thanks in advance,

Asadur

Hi Asadur, 

The surface mapping is not a good manner for the visualization of Basal Ganglia. You may try different surface template provided in BNV, otherwise, using the volumetric view would be a better way. 

Best,
Mingrui

Hi Mingrui,

I am following up on this issue, currently working on a project trying to view an SPM file with clusters in the thalamus and basal ganglia.  I have tried different surface templates and wasn't able to view them.  How can I use the volumetric view?

Best,
Carol

Hi Carol,

The statistical map can be mapped onto the volumetric slices, by using software like MRICronN. This manner can display subcortical clusters clearly.

Best,
Mingrui