sdm-help-list > SDM stopped running during Mean
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Dec 9, 2017  04:12 AM | he zhen
SDM stopped running during Mean
Dear all,
       I was in trouble using SDM.
       After finishing the Preprocessing, a warning message is displayed. Than, the software stopped running during the calculation of the Mean. I hope all the experts and scholars can help me.
Best wishes for all,
HeZhen

1.The following is the Log content:
       _________________________________________________________
Launching Preprocessing...
Launched: sdm pp gray matter, 1, 20, gray matter, 1
Analyzing coordinates
Creating anisotropic space
Preprocessing studies
Preprocessing Monte Carlo permutation
WARNING: Compressed file 'pp_(null).nii.gz' not found.
Removing p
WARNING: Compressed file 'pp_(null).nii.gz' not found.
WARNING: Compressed file 'MyMean_z.nii.gz' not found. revious permutations
Calling web browser
Pre-processing finished!
_________________________________________________________
Launching Mean...
Saving

2.The following is content of Batch listing:
# Preprocess the studies ('gray matter', anisotropy = 1, isotropic FWHM = 20mm, mask = ' gray matter', 1 randomizations):
pp gray matter, 1, 20, gray matter, 1
# Calculate the mean of all studies as MyMean
MyMean = mean 0
Dec 14, 2017  07:12 AM | Anton Albajes-Eizagirre - FIDMAG - Germanes Hospitalaries
RE: SDM stopped running during Mean
Dear HeZen,

Could you please paste here the contents of the execution log (Tools -> View Execution Log)

Thanks,

Anton
Dec 15, 2017  01:12 AM | he zhen
RE: SDM stopped running during Mean
aAnalyzing coordinates

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aCreating anisotropic space
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aPreprocessing studies
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aPreprocessing Monte Carlo permutation 1 of 1
WARNING: Compressed file 'pp_(null).nii.gz' not found.
The program will close as this problem could cause fatal errors.
aRemoving previous permutations
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aCalling web browser to display the report
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About to execute: s_exec: "D:\MetaAnalysisTools\SDM\SdmGui-win64\bin\windows64/sdm_core" pp_start 1,gray_matter,1.000000,20.000000,gray_matter
About to execute: s_exec: "D:\MetaAnalysisTools\SDM\SdmGui-win64\bin\windows64/sdm_core" pp_rand 1,1,gray_matter,1.000000,20.000000,gray_matter
About to execute: s_exec: "D:\MetaAnalysisTools\SDM\SdmGui-win64\bin\windows64/sdm_core" pp_end 1,gray_matter,1.000000,20.000000,gray_matter
WARNING: Compressed file 'pp_(null).nii.gz' not found.
The program will close as this problem could cause fatal errors.
aSaving probabilities
WARNING: Compressed file 'MyMean_z.nii.gz' not found.
The program will close as this problem could cause fatal errors.
About to execute: s_exec: "D:\MetaAnalysisTools\SDM\SdmGui-win64\bin\windows64/sdm_core" lm_start 0,MyMean,,,,,
About to execute: s_exec: "D:\MetaAnalysisTools\SDM\SdmGui-win64\bin\windows64/sdm_core" lm_end 0,MyMean,,,,,
Jan 21, 2018  06:01 PM | Anton Albajes-Eizagirre - FIDMAG - Germanes Hospitalaries
RE: SDM stopped running during Mean
Dear He Zen,

I am sorry about the late reply. Can  you send us the sdm_table.txt file? Also, can you tell us which is the location of the study data? (the complete path to sdm_table.txt)

Best,

Anton