help > Preprocessed, Denoised rsfMRI images in Conn
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Feb 19, 2018 11:02 PM | kati Voigt
Preprocessed, Denoised rsfMRI images in Conn
Hi,
I'm fairly new to the CONN toolbox, so apologise in advance for this very basic question.
I used CONN to preprocess and denoise my resting-state fMRI data set.
Now I would like to use these preprocessed images for further analyses in SPM.
I just wanted to double check that the images I am after are the one with the prefix "swu". Are these the denoised images? Or are these the images until the smoothing preprocessing step?
Thanks very much in advance for your help,
Kati
I'm fairly new to the CONN toolbox, so apologise in advance for this very basic question.
I used CONN to preprocess and denoise my resting-state fMRI data set.
Now I would like to use these preprocessed images for further analyses in SPM.
I just wanted to double check that the images I am after are the one with the prefix "swu". Are these the denoised images? Or are these the images until the smoothing preprocessing step?
Thanks very much in advance for your help,
Kati
Feb 20, 2018 03:02 AM | Joe Clark - University of Colorado - Boulder
RE: Preprocessed, Denoised rsfMRI images in Conn
Hi Kati,
I've found the best documentation exists here: https://sites.google.com/view/conn/tutorials
To answer your specific question, the prefixed images follow spm convention as documented here: https://docs.google.com/presentation/d/1mReC2s4kBmfWrVRFCZ_Q7Nv17TgUYbNwiHfvRx65hWc/present?slide=id.p6
But those are not the denoised images, those are found in the conn project's 'results/preprocessed' folder as documented here: https://docs.google.com/presentation/d/1BrIq2UKjN5zemgedghHPrZ8Ck40bMp96tDHOfvBNDvk/present?slide=id.p19
Hope this helps!
- Joe
I've found the best documentation exists here: https://sites.google.com/view/conn/tutorials
To answer your specific question, the prefixed images follow spm convention as documented here: https://docs.google.com/presentation/d/1mReC2s4kBmfWrVRFCZ_Q7Nv17TgUYbNwiHfvRx65hWc/present?slide=id.p6
But those are not the denoised images, those are found in the conn project's 'results/preprocessed' folder as documented here: https://docs.google.com/presentation/d/1BrIq2UKjN5zemgedghHPrZ8Ck40bMp96tDHOfvBNDvk/present?slide=id.p19
Hope this helps!
- Joe