open-discussion > Using DTI to plan a DBS surgery - Trackvis
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Jan 29, 2019 12:01 PM | Benjamin Davidson
Using DTI to plan a DBS surgery - Trackvis
Hi all,
I'm trying to plan a DBS surgery using an ROI generated in Trackvis using DTI. I can't seem to save the ROI as anything other than a .scene file. Does anyone know a way I can get this ROI as a Nifti or something I can use?
Thanks!!
I'm trying to plan a DBS surgery using an ROI generated in Trackvis using DTI. I can't seem to save the ROI as anything other than a .scene file. Does anyone know a way I can get this ROI as a Nifti or something I can use?
Thanks!!
Jan 29, 2019 01:01 PM | Martin Styner
RE: Using DTI to plan a DBS surgery - Trackvis
Originally posted by neuronerd:
Martin
Hi all,
I'm trying to plan a DBS surgery using an ROI generated in Trackvis using DTI. I can't seem to save the ROI as anything other than a .scene file. Does anyone know a way I can get this ROI as a Nifti or something I can use?
Thanks!!
Not sure this is the right forum for
your question (as this is really about DTIPrep, i.e. QC of
DTI/dMRI data), as my lab does not use Trackvis, but rather
performs tractography in 3D Slicer.I'm trying to plan a DBS surgery using an ROI generated in Trackvis using DTI. I can't seem to save the ROI as anything other than a .scene file. Does anyone know a way I can get this ROI as a Nifti or something I can use?
Thanks!!
Martin
Jan 31, 2019 01:01 PM | Benjamin Davidson
RE: Using DTI to plan a DBS surgery - Trackvis
Thanks Martin!
Feb 21, 2019 02:02 PM | Rachel Steiner - University of Wisconsin - Madison
RE: Using DTI to plan a DBS surgery - Trackvis
Originally posted by neuronerd:
Yes I was going to suggest Slicer for your particular needs since the interactive tracking (fiducicial tracking) feature is effectively designed for potential applications like surgical planning. As you move the seed or fiducial or roi, the track changes in real time. Let me know if you’d like more information. It’s a very cool tool with many capabilities. check it out.
Thanks Martin!
Yes I was going to suggest Slicer for your particular needs since the interactive tracking (fiducicial tracking) feature is effectively designed for potential applications like surgical planning. As you move the seed or fiducial or roi, the track changes in real time. Let me know if you’d like more information. It’s a very cool tool with many capabilities. check it out.