help > Desikan-Killiany atlas on surface
Sep 4, 2017 06:09 AM
Desikan-Killiany atlas on surface
I can not visualize the desikan-killiany atlas (from freesurfer) on the cortical surface without empty pathes. The resulting image is attached.
This is what I did:
1) converted the freesurfer/subjects/cvs_avg35_inMNI/mri/aparc+aseg.mgz file to .nii (using mri_convert with no special settings)
2) visualised the resulting nifti file on the ICBM152_smoothed surface with the followung settings:
- shading: flat
- opacity: 0.9
- map algorithm: Most Neighbor Voxel
- adjust for null: yes
I also tried to create a mesh using the matching ?h.pial surface files, but it seems as if the pial surfaces are in a different space, and the resulting surface mapping in even worse.
All the best,
|Desikan-Killiany atlas on surface||Louise Johansen||Sep 4, 2017|
|RE: Desikan-Killiany atlas on surface||Mingrui Xia||Sep 13, 2017|